RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 FAM3DQ96BQ1 224 aa17.68■□□□□ 0.42
SNRPA1-205ENST00000558036 CNTD2Q9H8S5 307 aa17.68■□□□□ 0.42
SNRPA1-205ENST00000558036 HOXD4P09016 255 aaPredicted RBP17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 CALCBP10092 127 aa17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 POU3F4P49335 361 aa17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 EFNB2P52799 333 aa17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 FAM3AP98173 230 aa17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 HLXQ14774 488 aaPredicted RBP17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 UBE2V2Q15819 145 aa17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 C2orf76Q3KRA6 126 aa17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 NKAIN3Q8N8D7 197 aa17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 WDR31Q8NA23 367 aa17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 SYNPRQ8TBG9 265 aa17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 SP140LQ9H930 580 aa17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 MRPS7Q9Y2R9 242 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 ZGRF1Q86YA3 2104 aa17.67■□□□□ 0.42
SNRPA1-205ENST00000558036 ZNF14P17017 642 aaPredicted RBP17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 GSK3AP49840 483 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 Q6ZSR3 168 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 BEND4Q6ZU67 534 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 PGAP1Q75T13 922 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 ZFP3Q96NJ6 502 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 STARD10Q9Y365 291 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 RHBDD3Q9Y3P4 386 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 A0A0G2JNJ9 132 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 hCG_38984A0A1B0GV85 526 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 LOC390937A0A1W2PQ73 354 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 HCKP08631 526 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 OCMP0CE72 109 aaPredicted RBP17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 CFPP27918 469 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 HOXC12P31275 282 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 ZNF181Q2M3W8 571 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 EIF2S3LQ2VIR3 472 aaKnown RBP17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 OR6M1Q8NGM8 313 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 CCDC32Q9BV29 185 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 SFXN3Q9BWM7 321 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 POFUT1Q9H488 388 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 Q9UFV3 132 aa17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 TPRP12270 2363 aaKnown RBP17.66■□□□□ 0.42
SNRPA1-205ENST00000558036 CD37P11049 281 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 IL7P13232 177 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 THBS4P35443 961 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 ZNF93P35789 620 aaPredicted RBP17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 GK2Q14410 553 aaPredicted RBP17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 P2RY6Q15077 328 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 OR10K2Q6IF99 312 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 BHLHA15Q7RTS1 189 aaPredicted RBP17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 Q8N402 240 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 C1orf162Q8NEQ5 155 aaPredicted RBP17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 ABHD1Q96SE0 405 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 GAL3ST1Q99999 423 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 CHST5Q9GZS9 411 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 GPR173Q9NS66 373 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 ADGRG4Q8IZF6 3080 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 LINC00854A0A1B0GVQ3 168 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 EEF1E1-BLOC1S5C9J1V9 151 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 EEF1E1O43324 174 aaKnown RBP17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 XRCC2O43543 280 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 CSF3P09919 207 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 ARSBP15848 533 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 PITPNBP48739 271 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 RIPPLY1Q0D2K3 151 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 TAB1Q15750 504 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 RGS21Q2M5E4 152 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 METAP1DQ6UB28 335 aaPredicted RBP17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 RFT1Q96AA3 541 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 APOBEC3DQ96AK3 386 aaPredicted RBP17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 SORCS2Q96PQ0 1159 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 RGCCQ9H4X1 137 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 METTL17Q9H7H0 456 aaPredicted RBP17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 RHBDL2Q9NX52 303 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 PTTG3PQ9NZH4 202 aa17.65■□□□□ 0.42
SNRPA1-205ENST00000558036 TMEM272A0A1B0GTI8 110 aa17.64■□□□□ 0.41
SNRPA1-205ENST00000558036 MAP2K3P46734 347 aa17.64■□□□□ 0.41
SNRPA1-205ENST00000558036 C1orf100Q5SVJ3 147 aa17.64■□□□□ 0.41
SNRPA1-205ENST00000558036 ALKBH2Q6NS38 261 aa17.64■□□□□ 0.41
SNRPA1-205ENST00000558036 RFPL4BQ6ZWI9 263 aa17.64■□□□□ 0.41
SNRPA1-205ENST00000558036 BIVMQ86UB2 503 aa17.64■□□□□ 0.41
SNRPA1-205ENST00000558036 CCDC36Q8IYA8 594 aa17.64■□□□□ 0.41
SNRPA1-205ENST00000558036 PP6455Q8WZ26 134 aa17.64■□□□□ 0.41
SNRPA1-205ENST00000558036 AKAP1Q92667 903 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNRPA1-205ENST00000558036 PIGTQ969N2 578 aa17.64■□□□□ 0.41
SNRPA1-205ENST00000558036 SPSB4Q96A44 273 aa17.64■□□□□ 0.41
SNRPA1-205ENST00000558036 MRI1Q9BV20 369 aa17.64■□□□□ 0.41
SNRPA1-205ENST00000558036 ETV7Q9Y603 341 aa17.64■□□□□ 0.41
SNRPA1-205ENST00000558036 LOC100289279A0A1B0GTE1 492 aa17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 A0A1W2PQ09 198 aa17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 TMEM127O75204 238 aa17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 ART1P52961 327 aa17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 TBC1D28Q2M2D7 210 aa17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 GDPD1Q8N9F7 314 aa17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 OR5D18Q8NGL1 313 aa17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 ERCC1P07992 297 aaPredicted RBP17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 RNASE12Q5GAN4 147 aaKnown RBP17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 SPATA46Q5T0L3 261 aa17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 MTFR2Q6P444 385 aa17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 GCDHQ92947 438 aaPredicted RBP17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 FOXRED1Q96CU9 486 aaPredicted RBP17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 ZNF391Q9UJN7 358 aa17.63■□□□□ 0.41
SNRPA1-205ENST00000558036 MAGEB3O15480 346 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms