RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 CDC14CA4D256 554 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 CDC14BO60729 498 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 ADH6P28332 368 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 NPBWR1P48145 328 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 HSD11B2P80365 405 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 TLE3Q04726 772 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 IL15RAQ13261 267 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 THEM4Q5T1C6 240 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 RTL6Q6ICC9 239 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 GLIPR1L1Q6UWM5 242 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 COX15Q7KZN9 410 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 EMG1Q92979 244 aaKnown RBP14.44□□□□□ -0.1
SHMT2-232ENST00000557487 OR5B2Q96R09 309 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 TMEM59Q9BXS4 323 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 PARP11Q9NR21 331 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 SMCO4Q9NRQ5 59 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 ALKBH4Q9NXW9 302 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 WNT16Q9UBV4 365 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 PIAS3Q9Y6X2 628 aa14.44□□□□□ -0.1
SHMT2-232ENST00000557487 CACNA1CQ13936 2221 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 LOC101059948A0A1B0GTJ6 334 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 ZNF878C9JN71 531 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 PRSS44E7EML9 344 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 MFNGO00587 321 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 CA11O75493 328 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 GAPDHP04406 335 aaKnown RBP14.43□□□□□ -0.1
SHMT2-232ENST00000557487 LAP3P28838 519 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 SULT1A2P50226 295 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 RAB5BP61020 215 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 PEA15Q15121 130 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 PPA1Q15181 289 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 GFOD2Q3B7J2 385 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 C15orf54Q8N8G6 183 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 TMEM41AQ96HV5 264 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 TGM7Q96PF1 710 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 SEC61A2Q9H9S3 476 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 ASH2LQ9UBL3 628 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 RNASEK-C17orf49H0YIS7 233 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 H3BMH7 237 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 ZNF217O75362 1048 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 CST4P01036 141 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 CRYBA1P05813 215 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 CD5P06127 495 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 CCL1P22362 96 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 OR1D4P47884 311 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 SRSF3P84103 164 aaKnown RBP14.43□□□□□ -0.1
SHMT2-232ENST00000557487 POU3F1Q03052 451 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-232ENST00000557487 C17orf67Q0P5P2 114 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 NSDHLQ15738 373 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 TMPRSS9Q7Z410 1059 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 TMEM200AQ86VY9 491 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 C17orf82Q86X59 251 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-232ENST00000557487 ADPRHL1Q8NDY3 354 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 LILRB1Q8NHL6 650 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-232ENST00000557487 ZNF768Q9H5H4 540 aaKnown RBP14.43□□□□□ -0.1
SHMT2-232ENST00000557487 ESRP2Q9H6T0 727 aaKnown RBP14.43□□□□□ -0.1
SHMT2-232ENST00000557487 METTL8Q9H825 291 aaKnown RBP14.43□□□□□ -0.1
SHMT2-232ENST00000557487 OSGIN2Q9Y236 505 aa14.43□□□□□ -0.1
SHMT2-232ENST00000557487 RPH3AQ9Y2J0 694 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-232ENST00000557487 NCOR1O75376 2440 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 A0A1W2PPC4 97 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 FBXO24O75426 580 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 WISP1O95388 367 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 MPIG6BO95866 241 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 MUC1P15941 1255 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-232ENST00000557487 AMY2BP19961 511 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 FBLP22087 321 aaKnown RBP14.42□□□□□ -0.1
SHMT2-232ENST00000557487 OR3A2P47893 321 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 NPY4RP50391 375 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 F2RL1P55085 397 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 PLAC9Q5JTB6 97 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 OR5AS1Q8N127 324 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 FAM89BQ8N5H3 189 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 COMMD1Q8N668 190 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 OR2AJ1Q8NGZ0 328 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 RXFP4Q8TDU9 374 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 C1orf147Q96MC9 270 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-232ENST00000557487 C5orf34Q96MH7 638 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 USB1Q9BQ65 265 aaKnown RBP14.42□□□□□ -0.1
SHMT2-232ENST00000557487 RTBDNQ9BSG5 229 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-232ENST00000557487 NICN1Q9BSH3 213 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 ADAT1Q9BUB4 502 aaKnown RBP14.42□□□□□ -0.1
SHMT2-232ENST00000557487 EGLN1Q9GZT9 426 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 TAF9BQ9HBM6 251 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 OR5AC2Q9NZP5 309 aa14.42□□□□□ -0.1
SHMT2-232ENST00000557487 A0A0A6YYD4 124 aa14.41□□□□□ -0.1
SHMT2-232ENST00000557487 MSGN1A6NI15 193 aa14.41□□□□□ -0.1
SHMT2-232ENST00000557487 C17orf51A8MQB3 221 aa14.41□□□□□ -0.1
SHMT2-232ENST00000557487 ETV2O00321 342 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-232ENST00000557487 ADAM10O14672 748 aa14.41□□□□□ -0.1
SHMT2-232ENST00000557487 JTBO76095 146 aa14.41□□□□□ -0.1
SHMT2-232ENST00000557487 SPP1P10451 314 aa14.41□□□□□ -0.1
SHMT2-232ENST00000557487 DVL1P1P54792 670 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-232ENST00000557487 GFERP55789 205 aa14.41□□□□□ -0.1
SHMT2-232ENST00000557487 SUPT4H1P63272 117 aaKnown RBP14.41□□□□□ -0.1
SHMT2-232ENST00000557487 SLC9A3R2Q15599 337 aa14.41□□□□□ -0.1
SHMT2-232ENST00000557487 RNF212Q495C1 297 aa14.41□□□□□ -0.1
SHMT2-232ENST00000557487 FAM76BQ5HYJ3 339 aa14.41□□□□□ -0.1
SHMT2-232ENST00000557487 BTNL8Q6UX41 500 aa14.41□□□□□ -0.1
SHMT2-232ENST00000557487 SFT2D1Q8WV19 159 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms