RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 GMDSO60547 372 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 ZNF823P16415 610 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 AMY2BP19961 511 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 GNGT1P63211 74 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 ECH1Q13011 328 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 IKZF1Q13422 519 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 DCXRQ7Z4W1 244 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 COPS4Q9BT78 406 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 MYLK2Q9H1R3 596 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 TOR3AQ9H497 397 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 CNTD2Q9H8S5 307 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 FAM96BQ9Y3D0 163 aa11.57□□□□□ -0.56
SLIRP-210ENST00000557431 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-210ENST00000557431 ARPC3O15145 178 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 TBX1O43435 398 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 GADD45GO95257 159 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 LHBP01229 141 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 GYPBP06028 91 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 SPARCP09486 303 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 MSX2P35548 267 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-210ENST00000557431 PSME3P61289 254 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 CDONQ4KMG0 1287 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 TEX36Q5VZQ5 186 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 GDPGP1Q6ZNW5 385 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 Q8N7P7 452 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 PROKR2Q8NFJ6 384 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 C17orf50Q8WW18 174 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 H1FXQ92522 213 aaKnown RBP11.56□□□□□ -0.56
SLIRP-210ENST00000557431 SPTSSAQ969W0 71 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 SLC22A4Q9H015 551 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 PPA2Q9H2U2 334 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 DPAGT1Q9H3H5 408 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 KRCC1Q9NPI7 259 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-210ENST00000557431 SNTG1Q9NSN8 517 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 CENPMQ9NSP4 180 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 VPREB3Q9UKI3 123 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 FOXJ3Q9UPW0 622 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 AP3M1Q9Y2T2 418 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 COMMD3-BMI1R4GMX3 469 aa11.56□□□□□ -0.56
SLIRP-210ENST00000557431 FBP1P09467 338 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 CSF1P09603 554 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 CLUP10909 449 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 OTX1P32242 354 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-210ENST00000557431 RPL15P61313 204 aaKnown RBP11.55□□□□□ -0.56
SLIRP-210ENST00000557431 KRT72Q14CN4 511 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 LY6EQ16553 131 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 C2orf68Q2NKX9 166 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 BEAN1Q3B7T3 259 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 SLC35E4Q6ICL7 350 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 WDR82Q6UXN9 313 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 PIGWQ7Z7B1 504 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 ZDHHC21Q8IVQ6 265 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 LYG1Q8N1E2 194 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 ZNF511Q8NB15 262 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 OR8S1Q8NH09 359 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 SLAMF6Q96DU3 332 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 ITPKCQ96DU7 683 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 HOPXQ9BPY8 73 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-210ENST00000557431 C16orf95Q9H693 158 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 EFCAB1Q9HAE3 211 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 ELL3Q9HB65 397 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-210ENST00000557431 DCAF13Q9NV06 445 aaKnown RBP11.55□□□□□ -0.56
SLIRP-210ENST00000557431 MRPL15Q9P015 296 aaKnown RBP11.55□□□□□ -0.56
SLIRP-210ENST00000557431 ABCD2Q9UBJ2 740 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 KPTNQ9Y664 436 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 NOTCH3Q9UM47 2321 aa11.55□□□□□ -0.56
SLIRP-210ENST00000557431 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.54□□□□□ -0.56
SLIRP-210ENST00000557431 A0A1B0GVI7 797 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 NPFFO15130 113 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 NDUFA2O43678 99 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 SEMG1P04279 462 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 RRM2P31350 389 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 SAA4P35542 130 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 GSSP48637 474 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 TAF13Q15543 124 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 GFOD2Q3B7J2 385 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 DRAM2Q6UX65 266 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 HACD2Q6Y1H2 254 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 C1orf122Q6ZSJ8 110 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 SLC16A9Q7RTY1 509 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 DPY19L4Q7Z388 723 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 LINC00471Q8N535 108 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 LY6G5BQ8NDX9 201 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 OR1M1Q8NGA1 313 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 OR9Q2Q8NGE9 314 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 OR8D4Q8NGM9 314 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 LRTOMTQ8WZ04 291 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 RORBQ92753 470 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 CMTM5Q96DZ9 223 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 DDOQ99489 341 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 KCNJ15Q99712 375 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 WDR13Q9H1Z4 485 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 TRIM36Q9NQ86 728 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 DNAJC27Q9NZQ0 273 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 KAAG1Q9UBP8 84 aa11.54□□□□□ -0.56
SLIRP-210ENST00000557431 PRPF19Q9UMS4 504 aaKnown RBP11.54□□□□□ -0.56
SLIRP-210ENST00000557431 NOP16Q9Y3C1 178 aaKnown RBP11.54□□□□□ -0.56
SLIRP-210ENST00000557431 MEIOCA2RUB1 952 aa11.53□□□□□ -0.56
SLIRP-210ENST00000557431 BTBD17A6NE02 478 aa11.53□□□□□ -0.56
SLIRP-210ENST00000557431 ANKRD61A6NGH8 418 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms