RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 NANOGQ9H9S0 305 aa2.92□□□□□ -1.94
CHD8-212ENST00000557329 CAB39LQ9H9S4 337 aa2.92□□□□□ -1.94
CHD8-212ENST00000557329 OR5V1Q9UGF6 321 aa2.92□□□□□ -1.94
CHD8-212ENST00000557329 LEF1Q9UJU2 399 aaPredicted RBP2.92□□□□□ -1.94
CHD8-212ENST00000557329 PURGQ9UJV8 347 aaKnown RBP2.92□□□□□ -1.94
CHD8-212ENST00000557329 FOXJ3Q9UPW0 622 aa2.92□□□□□ -1.94
CHD8-212ENST00000557329 RNF11Q9Y3C5 154 aa2.92□□□□□ -1.94
CHD8-212ENST00000557329 CACNG2Q9Y698 323 aa2.92□□□□□ -1.94
CHD8-212ENST00000557329 AGRNO00468 2067 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 LCE6AA0A183 80 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 G3V2L1 256 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 H0YL77 283 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 TRAPPC2LH3BP13 241 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 UBXN8O00124 270 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 PLXNB1O43157 2135 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 EFNA2O43921 213 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 SCN2BO60939 215 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 BANF1O75531 89 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 CLPXO76031 633 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 NDUFA7O95182 113 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 IGKV3-15P01624 115 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 KRT14P02533 472 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 MT-ND2P03891 347 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 UROSP10746 265 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 GFAPP14136 432 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 ATP6V1C1P21283 382 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 GTF2E2P29084 291 aaKnown RBP2.91□□□□□ -1.94
CHD8-212ENST00000557329 SSTR1P30872 391 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 CCNG1P51959 295 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 ABCE1P61221 599 aaKnown RBP2.91□□□□□ -1.94
CHD8-212ENST00000557329 PSPHP78330 225 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 CDK16Q00536 496 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 IFT88Q13099 833 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 SELENBP1Q13228 472 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 PDE7AQ13946 482 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 HERPUD1Q15011 391 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 OR4D1Q15615 310 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 TMEM44Q2T9K0 475 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 NDUFAF6Q330K2 333 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 RFTN2Q52LD8 501 aaPredicted RBP2.91□□□□□ -1.94
CHD8-212ENST00000557329 CCNJQ5T5M9 372 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 SLC27A4Q6P1M0 643 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 MSANTD1Q6ZTZ1 278 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 Q6ZVQ6 151 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 C17orf78Q8N4C9 275 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 DEFB108BQ8NET1 73 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 OR6F1Q8NGZ6 308 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 PIGXQ8TBF5 258 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 GPR119Q8TDV5 335 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 TM4SF18Q96CE8 201 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 TRIM44Q96DX7 344 aaPredicted RBP2.91□□□□□ -1.94
CHD8-212ENST00000557329 WDR34Q96EX3 536 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 CERS2Q96G23 380 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 RHOXF2Q9BQY4 288 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 CHID1Q9BWS9 393 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 EBPLQ9BY08 206 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 NMUR2Q9GZQ4 415 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 RACGAP1Q9H0H5 632 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 ELOVL6Q9H5J4 265 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 ALG9Q9H6U8 611 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 ZNF442Q9H7R0 627 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 THYN1Q9P016 225 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 MYEF2Q9P2K5 600 aaKnown RBP2.91□□□□□ -1.94
CHD8-212ENST00000557329 ZNF639Q9UID6 485 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 SIGLEC9Q9Y336 463 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 TENM2Q9NT68 2774 aa2.91□□□□□ -1.94
CHD8-212ENST00000557329 IGHV2OR16-5A0A0B4J2B6 119 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 MIF4GDA9UHW6 222 aaKnown RBP2.9□□□□□ -1.95
CHD8-212ENST00000557329 KLLNB2CW77 178 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 KIF2AO00139 706 aaPredicted RBP2.9□□□□□ -1.95
CHD8-212ENST00000557329 CCSO14618 274 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 TXNL1O43396 289 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 PRAF2O60831 178 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 FCGR3BO75015 233 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 CLN5O75503 358 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 IGKV1D-16P01601 117 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 IL3P08700 152 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 BCKDHAP12694 445 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 FOLR2P14207 255 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 PGAM1P18669 254 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 CCNOP22674 350 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 ELK4P28324 431 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 NTSP30990 170 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 CD80P33681 288 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 ELK3P41970 407 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 IER3P46695 156 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 P2RX1P51575 399 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 HADHBP55084 474 aaKnown RBP2.9□□□□□ -1.95
CHD8-212ENST00000557329 TAS2R39P59534 338 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 ZNF117Q03924 483 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 EMX1Q04741 257 aaPredicted RBP2.9□□□□□ -1.95
CHD8-212ENST00000557329 SCN1BQ07699 218 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 C2orf80Q0P641 193 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 HEPACAMQ14CZ8 416 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 QPRTQ15274 297 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 VPS26BQ4G0F5 336 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 SPANXN3Q5MJ09 141 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 RNLSQ5VYX0 342 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 LIPJQ5W064 366 aa2.9□□□□□ -1.95
CHD8-212ENST00000557329 TMEM225Q6GV28 225 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms