RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 PGAP1Q75T13 922 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 NR2C2APQ86WQ0 139 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 ADGRG4Q8IZF6 3080 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 OR5D14Q8NGL3 314 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 ADAT3Q96EY9 351 aaPredicted RBP20.51■□□□□ 0.87
SIX4-203ENST00000556952 TAS2R4Q9NYW5 299 aa20.51■□□□□ 0.87
SIX4-203ENST00000556952 ASH1LQ9NR48 2969 aaKnown RBP20.5■□□□□ 0.87
SIX4-203ENST00000556952 IGHV1-18A0A0C4DH31 117 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 A0A0G2JK05 382 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 hCG_38984A0A1B0GV85 526 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 FAM90A27PA6NNH2 459 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 TMEM127O75204 238 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 PPP3CBP16298 524 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 THBS4P35443 961 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 CAV3P56539 151 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 PPP3R1P63098 170 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 ZNF92Q03936 586 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 CEP78Q5JTW2 689 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 SFXN4Q6P4A7 337 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 UNQ6126/PRO20091Q6UXV3 157 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 ZNF101Q8IZC7 436 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 SEMA6DQ8NFY4 1073 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 C1QTNF6Q9BXI9 259 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 ZCCHC4Q9H5U6 513 aa20.5■□□□□ 0.87
SIX4-203ENST00000556952 PLEKHB1Q9UF11 243 aaPredicted RBP20.5■□□□□ 0.87
SIX4-203ENST00000556952 CLDN14O95500 239 aa20.49■□□□□ 0.87
SIX4-203ENST00000556952 GNALP38405 381 aa20.49■□□□□ 0.87
SIX4-203ENST00000556952 DDOSTP39656 456 aa20.49■□□□□ 0.87
SIX4-203ENST00000556952 MAP2K3P46734 347 aa20.49■□□□□ 0.87
SIX4-203ENST00000556952 OR10A3P58181 314 aa20.49■□□□□ 0.87
SIX4-203ENST00000556952 OR8B8Q15620 311 aa20.49■□□□□ 0.87
SIX4-203ENST00000556952 LILRB4Q8NHJ6 448 aa20.49■□□□□ 0.87
SIX4-203ENST00000556952 CA5BP1Q8WTZ4 195 aa20.49■□□□□ 0.87
SIX4-203ENST00000556952 PP6455Q8WZ26 134 aa20.49■□□□□ 0.87
SIX4-203ENST00000556952 LRRC46Q96FV0 321 aa20.49■□□□□ 0.87
SIX4-203ENST00000556952 AK6Q9Y3D8 172 aaKnown RBP20.49■□□□□ 0.87
SIX4-203ENST00000556952 MEGF11A6BM72 1044 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 ANKRD61A6NGH8 418 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 ANXA2P2A6NMY6 339 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 SMPD2O60906 423 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 NGFP01138 241 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 MAS1P04201 325 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 ZNF35P13682 527 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 FAM3AP98173 230 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 RIPPLY1Q0D2K3 151 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 ZNF529Q6P280 563 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 RFPL4BQ6ZWI9 263 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 NKAIN3Q8N8D7 197 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 KCTD12Q96CX2 325 aaKnown RBP20.48■□□□□ 0.87
SIX4-203ENST00000556952 REPIN1Q9BWE0 567 aaKnown RBP20.48■□□□□ 0.87
SIX4-203ENST00000556952 PIGLQ9Y2B2 252 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 STARD10Q9Y365 291 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 V9GY05 133 aa20.48■□□□□ 0.87
SIX4-203ENST00000556952 NKX2-6A6NCS4 301 aa20.47■□□□□ 0.87
SIX4-203ENST00000556952 ADRA2CP18825 462 aa20.47■□□□□ 0.87
SIX4-203ENST00000556952 GSK3AP49840 483 aa20.47■□□□□ 0.87
SIX4-203ENST00000556952 GK2Q14410 553 aaPredicted RBP20.47■□□□□ 0.87
SIX4-203ENST00000556952 ZBTB37Q5TC79 503 aa20.47■□□□□ 0.87
SIX4-203ENST00000556952 MRPL21Q7Z2W9 205 aaKnown RBP20.47■□□□□ 0.87
SIX4-203ENST00000556952 TBC1D15Q8TC07 691 aa20.47■□□□□ 0.87
SIX4-203ENST00000556952 ACOT12Q8WYK0 555 aa20.47■□□□□ 0.87
SIX4-203ENST00000556952 GFI1Q99684 422 aa20.47■□□□□ 0.87
SIX4-203ENST00000556952 C6orf62Q9GZU0 229 aaPredicted RBP20.47■□□□□ 0.87
SIX4-203ENST00000556952 NBPF19A0A087WUL8 3843 aa20.47■□□□□ 0.87
SIX4-203ENST00000556952 EPXP11678 715 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 RAB3AP20336 220 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 ZNF83P51522 516 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 DYNC1I2Q13409 638 aaKnown RBP20.46■□□□□ 0.87
SIX4-203ENST00000556952 UTS2BQ765I0 119 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 C1orf174Q8IYL3 243 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 RNASE6Q93091 150 aaKnown RBP20.46■□□□□ 0.87
SIX4-203ENST00000556952 SLC30A2Q9BRI3 323 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 CHST5Q9GZS9 411 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 SMURF1Q9HCE7 757 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 PTTG3PQ9NZH4 202 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 IGHV2OR16-5A0A0B4J2B6 119 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 SULT1B1O43704 296 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 ERCC1P07992 297 aaPredicted RBP20.46■□□□□ 0.87
SIX4-203ENST00000556952 FAHP16930 419 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 TUBG1P23258 451 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 ACKR3P25106 362 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 CFPP27918 469 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 GRNP28799 593 aaKnown RBP20.46■□□□□ 0.87
SIX4-203ENST00000556952 UCP2P55851 309 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 OR1M1Q8NGA1 313 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 TUBG2Q9NRH3 451 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 NPAP1Q9NZP6 1156 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 DAPK2Q9UIK4 370 aa20.46■□□□□ 0.87
SIX4-203ENST00000556952 A6NIN4 97 aa20.45■□□□□ 0.86
SIX4-203ENST00000556952 IFITM5A6NNB3 132 aa20.45■□□□□ 0.86
SIX4-203ENST00000556952 M0R1B8 84 aa20.45■□□□□ 0.86
SIX4-203ENST00000556952 AIPO00170 330 aa20.45■□□□□ 0.86
SIX4-203ENST00000556952 ALX3O95076 343 aa20.45■□□□□ 0.86
SIX4-203ENST00000556952 NAAAQ02083 359 aa20.45■□□□□ 0.86
SIX4-203ENST00000556952 TNK1Q13470 666 aa20.45■□□□□ 0.86
SIX4-203ENST00000556952 IDNKQ5T6J7 187 aa20.45■□□□□ 0.86
SIX4-203ENST00000556952 GLT8D1Q68CQ7 371 aa20.45■□□□□ 0.86
SIX4-203ENST00000556952 SEZ6L2Q6UXD5 910 aa20.45■□□□□ 0.86
SIX4-203ENST00000556952 OR6Q1Q8NGQ2 317 aa20.45■□□□□ 0.86
SIX4-203ENST00000556952 OR13C9Q8NGT0 318 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms