RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.25■□□□□ 0.67
TDP1-216ENST00000556867 GMPPBQ9Y5P6 360 aa19.25■□□□□ 0.67
TDP1-216ENST00000556867 IGHV3-64DA0A0J9YX35 117 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 A0A0U1RQV5 110 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 MSMBP08118 114 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 OR2T7P0C7T2 308 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 PMELP40967 661 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 ZMYND11Q15326 602 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 SNCBQ16143 134 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 OCLNQ16625 522 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 TMEM155Q4W5P6 130 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 MEDAGQ5VYS4 303 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 LRRC28Q86X40 367 aaPredicted RBP19.24■□□□□ 0.67
TDP1-216ENST00000556867 PLPP7Q8NBV4 271 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 CSNK2A3Q8NEV1 391 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 OR2T27Q8NH04 317 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 DVL3Q92997 716 aaPredicted RBP19.24■□□□□ 0.67
TDP1-216ENST00000556867 LYZL4Q96KX0 146 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 APOL4Q9BPW4 351 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 LPAR3Q9UBY5 353 aa19.24■□□□□ 0.67
TDP1-216ENST00000556867 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.23■□□□□ 0.67
TDP1-216ENST00000556867 LRRC30A6NM36 301 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 ENTPD6O75354 484 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 SRSF10O75494 262 aaKnown RBP19.23■□□□□ 0.67
TDP1-216ENST00000556867 APOL3O95236 402 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 MZT1Q08AG7 82 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 KRTAP21-3Q3LHN1 58 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 CHRFAM7AQ494W8 412 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 PRAMEF6Q5VXH4 476 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 SSX6Q7RTT6 188 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 GLCCI1Q86VQ1 547 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 C1orf87Q8N0U7 546 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 FTMTQ8N4E7 242 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 SPICQ8N5J4 248 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 OR51F2Q8NH61 342 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 ITFG2Q969R8 447 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 RDH12Q96NR8 316 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 PBOV1Q9GZY1 135 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 MOB1AQ9H8S9 216 aa19.23■□□□□ 0.67
TDP1-216ENST00000556867 NUFIP1Q9UHK0 495 aaKnown RBP19.23■□□□□ 0.67
TDP1-216ENST00000556867 MRM2Q9UI43 246 aaKnown RBP19.23■□□□□ 0.67
TDP1-216ENST00000556867 A0A1W2PQL4 384 aaPredicted RBP19.22■□□□□ 0.67
TDP1-216ENST00000556867 FSTL3O95633 263 aa19.22■□□□□ 0.67
TDP1-216ENST00000556867 CYB5R3P00387 301 aaPredicted RBP19.22■□□□□ 0.67
TDP1-216ENST00000556867 ANPEPP15144 967 aa19.22■□□□□ 0.67
TDP1-216ENST00000556867 ACKR3P25106 362 aa19.22■□□□□ 0.67
TDP1-216ENST00000556867 ATP6V1E1P36543 226 aa19.22■□□□□ 0.67
TDP1-216ENST00000556867 MDH2P40926 338 aaKnown RBP19.22■□□□□ 0.67
TDP1-216ENST00000556867 MTNR1AP48039 350 aa19.22■□□□□ 0.67
TDP1-216ENST00000556867 MFGE8Q08431 387 aaPredicted RBP19.22■□□□□ 0.67
TDP1-216ENST00000556867 RCN1Q15293 331 aa19.22■□□□□ 0.67
TDP1-216ENST00000556867 OR11L1Q8NGX0 322 aa19.22■□□□□ 0.67
TDP1-216ENST00000556867 TBX5Q99593 518 aa19.22■□□□□ 0.67
TDP1-216ENST00000556867 FN3KRPQ9HA64 309 aa19.22■□□□□ 0.67
TDP1-216ENST00000556867 C14orf119Q9NWQ9 140 aa19.22■□□□□ 0.67
TDP1-216ENST00000556867 ANKRD65E5RJM6 399 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 MAGEB4O15481 346 aaPredicted RBP19.21■□□□□ 0.67
TDP1-216ENST00000556867 FAM20BO75063 409 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 PNPP00491 289 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 IGLV3-1P01715 115 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 GABRB1P18505 474 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 MPPED2Q15777 294 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 CR1LQ2VPA4 569 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 FAM120AOSQ5T036 256 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 MUC20Q8N307 709 aaPredicted RBP19.21■□□□□ 0.67
TDP1-216ENST00000556867 OR10H4Q8NGA5 316 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 TMEM186Q96B77 213 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 PAPOLGQ9BWT3 736 aaKnown RBP19.21■□□□□ 0.67
TDP1-216ENST00000556867 SHARPINQ9H0F6 387 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 LPAR2Q9HBW0 351 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 UFSP2Q9NUQ7 469 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 FAM118AQ9NWS6 357 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 SMPD3Q9NY59 655 aaPredicted RBP19.21■□□□□ 0.67
TDP1-216ENST00000556867 UBAP1Q9NZ09 502 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 RHBDD3Q9Y3P4 386 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 R4GMQ9 66 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 WNK2Q9Y3S1 2297 aa19.21■□□□□ 0.67
TDP1-216ENST00000556867 TRAV20A0A0B4J274 112 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 LOC100130705A0A1B0GUX0 176 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 LOC110117498-PIK3R3F6TDL0 507 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 DLGAP1O14490 977 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 SLC16A6O15403 523 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 MPZL2O60487 215 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 KRT8P05787 483 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 IRF2P14316 349 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 PCMT1P22061 227 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 GNALP38405 381 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 ZNF684Q5T5D7 378 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 ENTHD1Q8IYW4 607 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 KLHL36Q8N4N3 616 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 OR8S1Q8NH09 359 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 PATZ1Q9HBE1 687 aaKnown RBP19.2■□□□□ 0.66
TDP1-216ENST00000556867 ABCB9Q9NP78 766 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 C8orf4Q9NR00 106 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 MPC1Q9Y5U8 109 aa19.2■□□□□ 0.66
TDP1-216ENST00000556867 SNTNA6NMZ2 147 aa19.19■□□□□ 0.66
TDP1-216ENST00000556867 SULT1C4O75897 302 aa19.19■□□□□ 0.66
TDP1-216ENST00000556867 CST4P01036 141 aa19.19■□□□□ 0.66
TDP1-216ENST00000556867 TTRP02766 147 aa19.19■□□□□ 0.66
TDP1-216ENST00000556867 ATP6V1B1P15313 513 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms