RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 RFT1Q96AA3 541 aa11.96□□□□□ -0.49
EFCAB11-212ENST00000556639 FAM3DQ96BQ1 224 aa11.96□□□□□ -0.49
EFCAB11-212ENST00000556639 TP63Q9H3D4 680 aaPredicted RBP11.96□□□□□ -0.49
EFCAB11-212ENST00000556639 PALMDQ9NP74 551 aa11.96□□□□□ -0.49
EFCAB11-212ENST00000556639 TMEM138Q9NPI0 162 aa11.96□□□□□ -0.49
EFCAB11-212ENST00000556639 Q9UFV3 132 aa11.96□□□□□ -0.49
EFCAB11-212ENST00000556639 MRPS7Q9Y2R9 242 aaKnown RBP11.96□□□□□ -0.49
EFCAB11-212ENST00000556639 SULT1B1O43704 296 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 CNOT4O95628 575 aaKnown RBP11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 APOA1P02647 267 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 SERPINA5P05154 406 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 CSF3P09919 207 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 PTHLHP12272 177 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 BMP5P22003 454 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 HTR2CP28335 458 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 GSK3AP49840 483 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 PSMD7P51665 324 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 KLRB1Q12918 225 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 RNASE12Q5GAN4 147 aaKnown RBP11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 MTFR2Q6P444 385 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 XKRXQ6PP77 449 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 CRIP3Q6Q6R5 217 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 SLC30A7Q8NEW0 376 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 GCDHQ92947 438 aaPredicted RBP11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 GPR173Q9NS66 373 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 NBASA2RRP1 2371 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 hCG_38984A0A1B0GV85 526 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 CALCBP10092 127 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 COX5BP10606 129 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 APLNRP35414 380 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 TAB1Q15750 504 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 UBE2NLQ5JXB2 153 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 ALKBH2Q6NS38 261 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 LIX1LQ8IVB5 337 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 SEMA6DQ8NFY4 1073 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 NANOS1Q8WY41 292 aaKnown RBP11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 PTTG3PQ9NZH4 202 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 ATPIF1Q9UII2 106 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 ADAM30Q9UKF2 790 aa11.95□□□□□ -0.5
EFCAB11-212ENST00000556639 TMEM272A0A1B0GTI8 110 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 LOC390937A0A1W2PQ73 354 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 MAGEB3O15480 346 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 IL7P13232 177 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 GK2Q14410 553 aaPredicted RBP11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 RFPL4BQ6ZWI9 263 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 OR5D18Q8NGL1 313 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 PIGTQ969N2 578 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 COL6A6A6NMZ7 2263 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 ARPC4-TTLL3A0A0A6YYG9 625 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 A0A1W2PQ09 198 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 MEGF11A6BM72 1044 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 LANCL1O43813 399 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 SSX4O60224 188 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 MTRF1O75570 445 aaKnown RBP11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 CRHP06850 196 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 HCKP08631 526 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 ZNF93P35789 620 aaPredicted RBP11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 C1orf100Q5SVJ3 147 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 SPATA46Q5T0L3 261 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 PCSK4Q6UW60 755 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 Q8N402 240 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 CCDC120Q96HB5 630 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 ZFP3Q96NJ6 502 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 RHBDL2Q9NX52 303 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 SHANK1Q9Y566 2161 aa11.94□□□□□ -0.5
EFCAB11-212ENST00000556639 hCG_2014768A0A024R1R8 64 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 ACACBO00763 2458 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 KDM4BO94953 1096 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 FAM157BP0CG42 384 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 CFPP27918 469 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 THBS4P35443 961 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 TALDO1P37837 337 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 OR3A4PP47883 348 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 PITPNBP48739 271 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 ERVS71-1P61550 626 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 FAM27E3Q08E93 113 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 ZNF181Q2M3W8 571 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 BEND4Q6ZU67 534 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 C22orf34Q6ZV56 151 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 PGAP1Q75T13 922 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 BHLHA15Q7RTS1 189 aaPredicted RBP11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 SPSB4Q96A44 273 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 CYYR1Q96J86 154 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 CCDC32Q9BV29 185 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 CHST5Q9GZS9 411 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 ZNF629Q9UEG4 869 aaPredicted RBP11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 EEF1E1-BLOC1S5C9J1V9 151 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 EEF1E1O43324 174 aaKnown RBP11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 ARSBP15848 533 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 ZNF12P17014 697 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 IL32P24001 234 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 CDK2P24941 298 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 RIPPLY1Q0D2K3 151 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 RGS21Q2M5E4 152 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 C1QL2Q7Z5L3 287 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 ANGPTL5Q86XS5 388 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 CENPSQ8N2Z9 138 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 NKAIN3Q8N8D7 197 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 GDPD1Q8N9F7 314 aa11.93□□□□□ -0.5
EFCAB11-212ENST00000556639 OR6M1Q8NGM8 313 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms