RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 CYSLTR2Q9NS75 346 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 PIGLQ9Y2B2 252 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 LSM2Q9Y333 95 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 CELSR2Q9HCU4 2923 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 A0A1B0GTI1 187 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 A6NIN4 97 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 TMEM212A6NML5 194 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 TPD52L2O43399 206 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 MRPS14O60783 128 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 DHRS3O75911 302 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 HLA-DPB1P04440 258 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 CA6P23280 308 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 ACKR3P25106 362 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 MAP2K3P46734 347 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 OR8B8Q15620 311 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 TSTQ16762 297 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 CDH24Q86UP0 819 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 FTMTQ8N4E7 242 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 TSPAN14Q8NG11 270 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 OR10AC1Q8NH08 325 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 TSEN15Q8WW01 171 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 DVL3Q92997 716 aaPredicted RBP11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 SMIM19Q96E16 107 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 TMEM100Q9NV29 134 aa11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 HRNRQ86YZ3 2850 aaPredicted RBP11.98□□□□□ -0.49
VIPAS39-208ENST00000556412 LMX1BO60663 402 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 IGLV3-1P01715 115 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 ERCC1P07992 297 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 FAHP16930 419 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 GNALP38405 381 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 LIPAP38571 399 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 DDOSTP39656 456 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 PPOXP50336 477 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 RIPPLY1Q0D2K3 151 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 TNK1Q13470 666 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 Q6ZR03 302 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 ZNF367Q7RTV3 350 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 CSNK2A3Q8NEV1 391 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 OR51A4Q8NGJ6 313 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 OR13C3Q8NGS6 347 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 GHSRQ92847 366 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 PERPQ96FX8 193 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 CGGBP1Q9UFW8 167 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 HHLA2Q9UM44 414 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 RHBDD3Q9Y3P4 386 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 IGHV3-64DA0A0J9YX35 117 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 C17orf100A8MU93 164 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 H0YL77 283 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 OGG1O15527 345 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 ATP6V1B1P15313 513 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 ACHEP22303 614 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 PSMB9P28065 219 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 MAGEB1P43366 347 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 CCL8P80075 99 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 OR8G1Q15617 311 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 NEDD8Q15843 81 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 DMKNQ6E0U4 476 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 OR13G1Q8NGZ3 307 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 PIGCQ92535 297 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 UFD1Q92890 307 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 ELMOD3Q96FG2 381 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 NR1H4Q96RI1 486 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 ADAT1Q9BUB4 502 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 RAB1BQ9H0U4 201 aa11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 MRPL15Q9P015 296 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 FBXO9Q9UK97 447 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-208ENST00000556412 CADP27708 2225 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 ZNF850A8MQ14 1090 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 H7C417 338 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 OVOL3O00110 214 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 NDUFS7O75251 213 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 IGHV1-46P01743 117 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 ISG15P05161 165 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 ZNF20P17024 532 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 CCL1P22362 96 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 SOX2P48431 317 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 BDH1Q02338 343 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 LIPKQ5VXJ0 399 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 PLPP7Q8NBV4 271 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 OR13C5Q8NGS8 318 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 OR14K1Q8NGZ2 314 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 TRMT61AQ96FX7 289 aaKnown RBP11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 SORCS2Q96PQ0 1159 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 MGLLQ99685 303 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 SLC30A2Q9BRI3 323 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 PPP1R3EQ9H7J1 279 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 ZNF696Q9H7X3 374 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 DECR2Q9NUI1 292 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 ENPP5Q9UJA9 477 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 DHDHQ9UQ10 334 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 ZNF281Q9Y2X9 895 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 V9GYS6 101 aa11.96□□□□□ -0.49
VIPAS39-208ENST00000556412 UNC79Q9P2D8 2635 aa11.96□□□□□ -0.5
VIPAS39-208ENST00000556412 CENPEQ02224 2701 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 A0A087WXM4 84 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 ZNF816-ZNF321PA0A0X1KG74 233 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 LOC390937A0A1W2PQ73 354 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 LY6HO94772 140 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 TNFSF4P23510 183 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 ATP5J2P56134 94 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms