RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 OR2T7P0C7T2 308 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 IRF2P14316 349 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 SNRPGP62308 76 aaKnown RBP12.78□□□□□ -0.36
ACTN1-217ENST00000556203 EGR3Q06889 387 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 MFGE8Q08431 387 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-217ENST00000556203 TMED1Q13445 227 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 OR8B8Q15620 311 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 MPPED2Q15777 294 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 ZNF181Q2M3W8 571 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 CR1LQ2VPA4 569 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 TMEM155Q4W5P6 130 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 SSX6Q7RTT6 188 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 GLCCI1Q86VQ1 547 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 LRRC28Q86X40 367 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-217ENST00000556203 KLBQ86Z14 1044 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 SPICQ8N5J4 248 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 SPERTQ8NA61 448 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 CSNK2A3Q8NEV1 391 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 OR10H4Q8NGA5 316 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 OR2T27Q8NH04 317 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 OR8S1Q8NH09 359 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 OR51F2Q8NH61 342 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 ERGIC1Q969X5 290 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 PAPOLGQ9BWT3 736 aaKnown RBP12.78□□□□□ -0.36
ACTN1-217ENST00000556203 BEX2Q9BXY8 128 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 PBOV1Q9GZY1 135 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 MRM2Q9UI43 246 aaKnown RBP12.78□□□□□ -0.36
ACTN1-217ENST00000556203 PCDHB10Q9UN67 800 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 RHBDD3Q9Y3P4 386 aa12.78□□□□□ -0.36
ACTN1-217ENST00000556203 FAM20BO75063 409 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 ANPEPP15144 967 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 ACKR3P25106 362 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 MDH2P40926 338 aaKnown RBP12.77□□□□□ -0.37
ACTN1-217ENST00000556203 MZT1Q08AG7 82 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 RCN1Q15293 331 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 OCLNQ16625 522 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 SLC25A30Q5SVS4 291 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 FAM201AQ5SY85 155 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 FAM120AOSQ5T036 256 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 MEDAGQ5VYS4 303 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 PLEKHG7Q6ZR37 379 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 IL17RELQ6ZVW7 336 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 COMMD2Q86X83 199 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 C1orf87Q8N0U7 546 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 KLHL36Q8N4N3 616 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 OR11L1Q8NGX0 322 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 Q8TCH9 128 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 TMEM186Q96B77 213 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 PPP1R3EQ9H7J1 279 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 FN3KRPQ9HA64 309 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 HIF1ANQ9NWT6 349 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 LPAR3Q9UBY5 353 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 AASSQ9UDR5 926 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 ZNF391Q9UJN7 358 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.77□□□□□ -0.37
ACTN1-217ENST00000556203 GTF2A1LQ9UNN4 478 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 R4GMQ9 66 aa12.77□□□□□ -0.37
ACTN1-217ENST00000556203 SETD2Q9BYW2 2564 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-217ENST00000556203 YLPM1P49750 1951 aaKnown RBP12.77□□□□□ -0.37
ACTN1-217ENST00000556203 SONP18583 2426 aaKnown RBP12.77□□□□□ -0.37
ACTN1-217ENST00000556203 NSD1Q96L73 2696 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-217ENST00000556203 A0A0U1RQV5 110 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 LOC100130705A0A1B0GUX0 176 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 A6NLC8 198 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 LOC110117498-PIK3R3F6TDL0 507 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 PLPP2O43688 288 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 SRSF10O75494 262 aaKnown RBP12.76□□□□□ -0.37
ACTN1-217ENST00000556203 PTBP3O95758 552 aaKnown RBP12.76□□□□□ -0.37
ACTN1-217ENST00000556203 PNPP00491 289 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 KRT8P05787 483 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 GRPP07492 148 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 GNALP38405 381 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 MTNR1AP48039 350 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 GABPB1Q06547 395 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-217ENST00000556203 SNCBQ16143 134 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 PRIMA1Q86XR5 153 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 MUC20Q8N307 709 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-217ENST00000556203 GALNT4Q8N4A0 578 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 FTMTQ8N4E7 242 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 PLPP7Q8NBV4 271 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 PPP1R14AQ96A00 147 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 RNFT2Q96EX2 444 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 C14orf119Q9NWQ9 140 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 FAM118AQ9NWS6 357 aa12.76□□□□□ -0.37
ACTN1-217ENST00000556203 SMPD3Q9NY59 655 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-217ENST00000556203 NUFIP1Q9UHK0 495 aaKnown RBP12.76□□□□□ -0.37
ACTN1-217ENST00000556203 PPIAL4EA0A075B759 164 aa12.75□□□□□ -0.37
ACTN1-217ENST00000556203 TRAV20A0A0B4J274 112 aa12.75□□□□□ -0.37
ACTN1-217ENST00000556203 ANXA2P2A6NMY6 339 aa12.75□□□□□ -0.37
ACTN1-217ENST00000556203 PPIAL4DF5H284 164 aa12.75□□□□□ -0.37
ACTN1-217ENST00000556203 RPP14O95059 124 aaKnown RBP12.75□□□□□ -0.37
ACTN1-217ENST00000556203 CST4P01036 141 aa12.75□□□□□ -0.37
ACTN1-217ENST00000556203 PPIAL4FP0DN26 164 aa12.75□□□□□ -0.37
ACTN1-217ENST00000556203 GABRB1P18505 474 aa12.75□□□□□ -0.37
ACTN1-217ENST00000556203 HNF1AP20823 631 aa12.75□□□□□ -0.37
ACTN1-217ENST00000556203 PCMT1P22061 227 aa12.75□□□□□ -0.37
ACTN1-217ENST00000556203 ZNF85Q03923 595 aa12.75□□□□□ -0.37
ACTN1-217ENST00000556203 LRRC36Q1X8D7 754 aa12.75□□□□□ -0.37
ACTN1-217ENST00000556203 BCL2L15Q5TBC7 163 aa12.75□□□□□ -0.37
ACTN1-217ENST00000556203 LPCAT4Q643R3 524 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms