RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 CCRL2O00421 344 aa10.68□□□□□ -0.7
SHMT2-221ENST00000555773 SERPINA3P01011 423 aa10.68□□□□□ -0.7
SHMT2-221ENST00000555773 TSTQ16762 297 aaKnown RBP10.68□□□□□ -0.7
SHMT2-221ENST00000555773 MSMPQ1L6U9 139 aa10.68□□□□□ -0.7
SHMT2-221ENST00000555773 AGAP6Q5VW22 663 aa10.68□□□□□ -0.7
SHMT2-221ENST00000555773 LIPKQ5VXJ0 399 aa10.68□□□□□ -0.7
SHMT2-221ENST00000555773 OR2T2Q6IF00 324 aa10.68□□□□□ -0.7
SHMT2-221ENST00000555773 MUC15Q8N387 334 aa10.68□□□□□ -0.7
SHMT2-221ENST00000555773 OR14K1Q8NGZ2 314 aa10.68□□□□□ -0.7
SHMT2-221ENST00000555773 MARVELD3Q96A59 401 aa10.68□□□□□ -0.7
SHMT2-221ENST00000555773 FAM71F1Q96KD3 344 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-221ENST00000555773 MRPL37Q9BZE1 423 aaKnown RBP10.68□□□□□ -0.7
SHMT2-221ENST00000555773 SLC22A4Q9H015 551 aa10.68□□□□□ -0.7
SHMT2-221ENST00000555773 PLEKHF2Q9H8W4 249 aa10.68□□□□□ -0.7
SHMT2-221ENST00000555773 CGGBP1Q9UFW8 167 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-221ENST00000555773 PNMA8CA0A1B0GUJ8 204 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 TIMM8AO60220 97 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-221ENST00000555773 GATBO75879 557 aaKnown RBP10.67□□□□□ -0.7
SHMT2-221ENST00000555773 CST4P01036 141 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 HLA-DPB1P04440 258 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 TFAP2AP05549 437 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 CD2P06729 351 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 BMP4P12644 408 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 GALP22466 123 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 GABRA5P31644 462 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 RPL5P46777 297 aaKnown RBP10.67□□□□□ -0.7
SHMT2-221ENST00000555773 GP2P55259 537 aaKnown RBP10.67□□□□□ -0.7
SHMT2-221ENST00000555773 SWI5Q1ZZU3 235 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 MST1LQ2TV78 715 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 C20orf204Q6ZNR8 217 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 TMEM200AQ86VY9 491 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 LRP11Q86VZ4 500 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 OR8G5Q8NG78 346 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 OR56B2PQ8NGI1 322 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 PHYHIPQ92561 330 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 SYT3Q9BQG1 590 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 SOX7Q9BT81 388 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 ZNF275Q9NSD4 429 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-221ENST00000555773 CBLN4Q9NTU7 201 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 TMEM100Q9NV29 134 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 NDUFB11Q9NX14 153 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 MRPL15Q9P015 296 aaKnown RBP10.67□□□□□ -0.7
SHMT2-221ENST00000555773 TAAR3PQ9P1P4 343 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 ENPP5Q9UJA9 477 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 FZR1Q9UM11 496 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 DHDHQ9UQ10 334 aa10.67□□□□□ -0.7
SHMT2-221ENST00000555773 SF3B6Q9Y3B4 125 aaKnown RBP10.67□□□□□ -0.7
SHMT2-221ENST00000555773 NOP16Q9Y3C1 178 aaKnown RBP10.67□□□□□ -0.7
SHMT2-221ENST00000555773 TRBV5-5A0A0J9YX44 114 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 ZNF816-ZNF321PA0A0X1KG74 233 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 A0A1W2PPW3 197 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 PLSCR5A0PG75 271 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 ANKRD30BLA7E2S9 258 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 RAF1P04049 648 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 DANCRP0C864 163 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 OCM2P0CE71 109 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 ACKR3P25106 362 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 MAPK3P27361 379 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-221ENST00000555773 ALDH3B2P48448 385 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 MMP15P51511 669 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 RPS11P62280 158 aaKnown RBP eCLIP10.66□□□□□ -0.7
SHMT2-221ENST00000555773 TNK1Q13470 666 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 SSX1Q16384 188 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 Q499Y3 187 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 ZMAT1Q5H9K5 638 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 PAMR1Q6UXH9 720 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 UNQ9370/PRO34162Q6UXP9 181 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 DTX2Q86UW9 622 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 OR5D14Q8NGL3 314 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 OR13C3Q8NGS6 347 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 OR13G1Q8NGZ3 307 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 PP6455Q8WZ26 134 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 RGP1Q92546 391 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-221ENST00000555773 PIGTQ969N2 578 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 FGGYQ96C11 551 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 TMED9Q9BVK6 235 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 MS4A5Q9H3V2 200 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 UBTD1Q9HAC8 227 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 ABCB9Q9NP78 766 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 PIGLQ9Y2B2 252 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 MPC1Q9Y5U8 109 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 PMF1-BGLAPU3KQ54 211 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 PTPN13Q12923 2485 aa10.66□□□□□ -0.7
SHMT2-221ENST00000555773 A0A1B0GWJ7 208 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 ZNF879B4DU55 563 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 GMDSO60547 372 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 CD36P16671 472 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 ZNF20P17024 532 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 GNALP38405 381 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 SNRPD2P62316 118 aaKnown RBP10.65□□□□□ -0.7
SHMT2-221ENST00000555773 NKPD1Q17RQ9 610 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 ALKBH6Q3KRA9 238 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 ACSM3Q53FZ2 586 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 CLVS2Q5SYC1 327 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 CD200R1LQ6Q8B3 271 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 SERPINA12Q8IW75 414 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 PARP16Q8N5Y8 322 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 SPERTQ8NA61 448 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 OR51A4Q8NGJ6 313 aa10.65□□□□□ -0.7
SHMT2-221ENST00000555773 OR13F1Q8NGS4 319 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms