RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ARR3P36575 388 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 GPR119Q8TDV5 335 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 CCDC74AQ96AQ1 378 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 ACTR3CQ9C0K3 210 aaPredicted RBP12.6□□□□□ -0.39
VTI1B-204ENST00000554659 PRDM7Q9NQW5 492 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 CYB5R1Q9UHQ9 305 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 YIF1AO95070 293 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 NQO2P16083 231 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 CSN1S1P47710 185 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 LGALS4P56470 323 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 PIGPP57054 158 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 BAMBIQ13145 260 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 OR2B11Q5JQS5 317 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 HMGCLL1Q8TB92 370 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 ING1Q9UK53 422 aaPredicted RBP12.6□□□□□ -0.39
VTI1B-204ENST00000554659 BCORQ6W2J9 1755 aa12.6□□□□□ -0.39
VTI1B-204ENST00000554659 SH2D1BO14796 132 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 SUB1P53999 127 aaKnown RBP eCLIP12.59□□□□□ -0.393e-8■■□□□ 12.5
VTI1B-204ENST00000554659 ZNF573Q86YE8 665 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 KIAA1958Q8N8K9 716 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 OR10G3Q8NGC4 313 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 RTN4IP1Q8WWV3 396 aaPredicted RBP12.59□□□□□ -0.39
VTI1B-204ENST00000554659 CORO2AQ92828 525 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 HLA-CQ95604 372 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 WDR34Q96EX3 536 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 TWSG1Q9GZX9 223 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 C12orf49Q9H741 205 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 PPP1R3CQ9UQK1 317 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 LAMP3Q9UQV4 416 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 FAM96BQ9Y3D0 163 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 SLX4Q8IY92 1834 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 PRSS23O95084 383 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 OR8G1Q15617 311 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 KCNE4Q8WWG9 221 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 MAP6Q96JE9 813 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 GNB4Q9HAV0 340 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 LANCL2Q9NS86 450 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 ZMAT5Q9UDW3 170 aaKnown RBP12.59□□□□□ -0.39
VTI1B-204ENST00000554659 MRPS2Q9Y399 296 aaKnown RBP12.59□□□□□ -0.39
VTI1B-204ENST00000554659 ZNF320A2RRD8 509 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 LRRC30A6NM36 301 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 AKR1C3P42330 323 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 SCAND1P57086 179 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 FAM219BQ5XKK7 198 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 YRDCQ86U90 279 aaKnown RBP12.59□□□□□ -0.39
VTI1B-204ENST00000554659 KLHDC1Q8N7A1 406 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 ZDHHC22Q8N966 263 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 OR10P1Q8NGE3 313 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 DPF1Q92782 380 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 ZDHHC11Q9H8X9 412 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 NRG2O14511 850 aaPredicted RBP12.59□□□□□ -0.39
VTI1B-204ENST00000554659 IGHV3-9P01782 118 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 FABP1P07148 127 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 ACSM4P0C7M7 580 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 LIMS3P0CW19 117 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 LIMS4P0CW20 117 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 SPP1P10451 314 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 GUCA2AQ02747 115 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 MOB1BQ7L9L4 216 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 BHLHA9Q7RTU4 235 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 PRSS42Q7Z5A4 293 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 GPR32P1Q8NGA4 272 aa12.59□□□□□ -0.39
VTI1B-204ENST00000554659 TCAPO15273 167 aa12.58□□□□□ -0.39
VTI1B-204ENST00000554659 NCR3LG1Q68D85 454 aa12.58□□□□□ -0.39
VTI1B-204ENST00000554659 COMMD1Q8N668 190 aa12.58□□□□□ -0.39
VTI1B-204ENST00000554659 NUDT9Q9BW91 350 aa12.58□□□□□ -0.39
VTI1B-204ENST00000554659 DLL4Q9NR61 685 aa12.58□□□□□ -0.39
VTI1B-204ENST00000554659 DECR2Q9NUI1 292 aa12.58□□□□□ -0.39
VTI1B-204ENST00000554659 TRAV20A0A0B4J274 112 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 OR7C2O60412 319 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 OR5G3P0C626 314 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 ZNF121P58317 390 aaPredicted RBP12.58□□□□□ -0.4
VTI1B-204ENST00000554659 TAS2R45P59539 299 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 KMT5CQ86Y97 462 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 CISD2Q8N5K1 135 aaKnown RBP12.58□□□□□ -0.4
VTI1B-204ENST00000554659 C11orf42Q8N5U0 333 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 HDGFL3Q9Y3E1 203 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 KIF13AQ9H1H9 1805 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 GPR31O00270 319 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 ADH4P08319 380 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 THBS4P35443 961 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 ACOT6Q3I5F7 207 aaPredicted RBP12.58□□□□□ -0.4
VTI1B-204ENST00000554659 ZNF528Q3MIS6 628 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 ZNF718Q3SXZ3 478 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 RHOFQ9HBH0 211 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 ANKUB1A6NFN9 424 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 PCBP4P57723 403 aaKnown RBP12.58□□□□□ -0.4
VTI1B-204ENST00000554659 ANKRD16Q6P6B7 361 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 MRGPRX1Q96LB2 322 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 CIB3Q96Q77 187 aaPredicted RBP12.58□□□□□ -0.4
VTI1B-204ENST00000554659 TOLLIPQ9H0E2 274 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 SLC2A8Q9NY64 477 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 GOLT1BQ9Y3E0 138 aa12.58□□□□□ -0.4
VTI1B-204ENST00000554659 FAM221AA4D161 298 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 ARPC3O15145 178 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 NKX2-2O95096 273 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 PTBP3O95758 552 aaKnown RBP12.57□□□□□ -0.4
VTI1B-204ENST00000554659 WNT1P04628 370 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 IAPPP10997 89 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 C21orf58P58505 322 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms