RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 CHRDL1Q9BU40 450 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 SLC6A13Q9NSD5 602 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 UFSP2Q9NUQ7 469 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 MTCH1Q9NZJ7 389 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 KCNE3Q9Y6H6 103 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 PDGFBP01127 241 aaPredicted RBP10.39□□□□□ -0.75
SYNE2-208ENST00000553289 FPR2P25090 351 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 INSM1Q01101 510 aaPredicted RBP10.39□□□□□ -0.75
SYNE2-208ENST00000553289 XAF1Q6GPH4 301 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 OR2A2Q6IF42 318 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 FAAP20Q6NZ36 180 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 DRAM2Q6UX65 266 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 PPP1R1CQ8WVI7 109 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 TAAR9Q96RI9 348 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 RHNO1Q9BSD3 238 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 RFPL4AA6NLU0 287 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 RFPL4AL1F8VTS6 287 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 PRSS36Q5K4E3 855 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 ZNF787Q6DD87 383 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 UQCC3Q6UW78 93 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 TSEN54Q7Z6J9 526 aaKnown RBP10.39□□□□□ -0.75
SYNE2-208ENST00000553289 HMGCLL1Q8TB92 370 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 PINX1Q96BK5 328 aaKnown RBP10.39□□□□□ -0.75
SYNE2-208ENST00000553289 FOXB1Q99853 325 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 PSENENQ9NZ42 101 aa10.39□□□□□ -0.75
SYNE2-208ENST00000553289 OR6C68A6NDL8 312 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 LINC00303Q3SY05 128 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 ZNF793Q6ZN11 406 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 MOB1BQ7L9L4 216 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 FAM58AQ8N1B3 248 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 BPIFCQ8NFQ6 507 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 OR1F12Q8NHA8 337 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 KTI12Q96EK9 354 aaPredicted RBP10.38□□□□□ -0.75
SYNE2-208ENST00000553289 ALG14Q96F25 216 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 MRGPRX3Q96LB0 322 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 SIRT5Q9NXA8 310 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 ATP23Q9Y6H3 246 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 GPR31O00270 319 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 CISD3P0C7P0 127 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 FUT3P21217 361 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 FBXW5Q969U6 566 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 COMMD5Q9GZQ3 224 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 A0A096LPE4 126 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 A0A1W2PPZ6 126 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 C2CD4DB7Z1M9 353 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 TRIM77I1YAP6 450 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 ST8SIA5O15466 376 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 HRO43593 1189 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 NDUFB6O95139 128 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 GP1BAP07359 652 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 POU2F2P09086 479 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 B4GALT1P15291 398 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 UBE2IP63279 158 aaKnown RBP10.38□□□□□ -0.75
SYNE2-208ENST00000553289 IL11RAQ14626 422 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 OR4S1Q8NGB4 309 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 OR5AP2Q8NGF4 316 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 OR5M8Q8NGP6 311 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 FAM173AQ9BQD7 235 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 FN3KRPQ9HA64 309 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 DNAJB12Q9NXW2 375 aaKnown RBP10.38□□□□□ -0.75
SYNE2-208ENST00000553289 KLK11Q9UBX7 282 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 CCDC187A0A096LP49 1063 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 DCTN6O00399 190 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 PIAS2O75928 621 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 AQP8O94778 261 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 ABCD3P28288 659 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 NOVA1P51513 510 aaKnown RBP10.38□□□□□ -0.75
SYNE2-208ENST00000553289 H3F3AP84243 136 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 HGDQ93099 445 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 DOK1Q99704 481 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 OR51I2Q9H344 312 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 GLI3P10071 1580 aa10.38□□□□□ -0.75
SYNE2-208ENST00000553289 IGHA2P01877 340 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 TLE1Q04724 770 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 EIF3IQ13347 325 aaKnown RBP10.37□□□□□ -0.75
SYNE2-208ENST00000553289 OR4F5Q8NH21 305 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 MRPS24Q96EL2 167 aaKnown RBP10.37□□□□□ -0.75
SYNE2-208ENST00000553289 OR4F4Q96R69 305 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 FOXQ1Q9C009 403 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 RNF24Q9Y225 148 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 URGCP-MRPS24S4R325 110 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 S100A8P05109 93 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 CRYBB2P43320 205 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 HAGHQ16775 308 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 PRICKLE4Q2TBC4 344 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 CEACAM16Q2WEN9 425 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 C11orf87Q6NUJ2 197 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 LCN15Q6UWW0 184 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 ZNF705AQ6ZN79 300 aaPredicted RBP10.37□□□□□ -0.75
SYNE2-208ENST00000553289 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.37□□□□□ -0.75
SYNE2-208ENST00000553289 GALMQ96C23 342 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 PELI1Q96FA3 418 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 CXorf58Q96LI9 332 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 C20orf24Q9BUV8 137 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 MICAL3Q7RTP6 2002 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 RRASP10301 218 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 ZBTB37Q5TC79 503 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 GPR32P1Q8NGA4 272 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 GPBAR1Q8TDU6 330 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 GINS3Q9BRX5 216 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms