RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 COL5A1-AS1Q5SY13 56 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 ZNF784Q8NCA9 323 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-212ENST00000546744 NUDT8Q8WV74 236 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 SLC2A9Q9NRM0 540 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 COA3Q9Y2R0 106 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-212ENST00000546744 C2orf72A6NCS6 295 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 RBFOX3A6NFN3 312 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 GCGP01275 180 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 HYAL4Q2M3T9 481 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 FAM181AQ8N9Y4 354 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 OTOSQ8NHW6 89 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 C4orf45Q96LM5 186 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 SEMA6CQ9H3T2 930 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 TCRBV16S1A1N1A0A5B0 115 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 NTF3P20783 257 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 ELLP55199 621 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-212ENST00000546744 KRTDAPP60985 99 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 KLHDC9Q8NEP7 349 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 NRIP2Q9BQI9 281 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 NAT8Q9UHE5 227 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 TNFSF18Q9UNG2 199 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 PTGFRP43088 359 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 GALR1P47211 349 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 LYRM7Q5U5X0 104 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 RGS7BPQ6MZT1 257 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-212ENST00000546744 CPEB2Q7Z5Q1 589 aaKnown RBP11.57□□□□□ -0.56
PTCH1-212ENST00000546744 LINC00469Q8N7U9 141 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 OR4S1Q8NGB4 309 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 DNAJA3Q96EY1 480 aa11.57□□□□□ -0.56
PTCH1-212ENST00000546744 CCDC163A0A0D9SF12 145 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 PTGER1P34995 402 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 THBS4P35443 961 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 P2RY2P41231 377 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 CSNK1EP49674 416 aaKnown RBP11.56□□□□□ -0.56
PTCH1-212ENST00000546744 PMS2P11Q13670 270 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 UBE2V2Q15819 145 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 RPL7L1Q6DKI1 246 aaKnown RBP11.56□□□□□ -0.56
PTCH1-212ENST00000546744 DPPA3Q6W0C5 159 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 UBE3DQ7Z6J8 389 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 SLC25A42Q86VD7 318 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 SLC39A11Q8N1S5 342 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 LIPHQ8WWY8 451 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 MR1Q95460 341 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 TSACCQ96A04 125 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-212ENST00000546744 GDE1Q9NZC3 331 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 ZNF391Q9UJN7 358 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 NTNG1Q9Y2I2 539 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 KCNE1BA0A087WTH5 132 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 A0A1W2PPH5 198 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 SSSCA1O60232 199 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 PRAMEF4O60810 478 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 GCH1P30793 250 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 P2RY1P47900 373 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 SUB1P53999 127 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTCH1-212ENST00000546744 IL24Q13007 206 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 ZNF154Q13106 437 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 SLC10A1Q14973 349 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 ACKR1Q16570 336 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 ZNF687Q8N1G0 1237 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 OR2T10Q8NGZ9 312 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 FGF14Q92915 247 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 SPSB1Q96BD6 273 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 INTS12Q96CB8 462 aaKnown RBP11.56□□□□□ -0.56
PTCH1-212ENST00000546744 LRRC3BQ96PB8 259 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 ANGPTL4Q9BY76 406 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 PRO1933Q9H354 126 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 CHST11Q9NPF2 352 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 SLC6A13Q9NSD5 602 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 TREM2Q9NZC2 230 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 FBXL17Q9UF56 701 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 LOC105371267A0A1B0GV96 52 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 ZC3H12DA2A288 527 aaKnown RBP11.56□□□□□ -0.56
PTCH1-212ENST00000546744 CXorf65A6NEN9 183 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 ZNF217O75362 1048 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 SEMA4FO95754 770 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 KLKB1P03952 638 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 QDPRP09417 244 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 ZNF25P17030 456 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-212ENST00000546744 CD22P20273 847 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 IRS1P35568 1242 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 RPL18Q07020 188 aaKnown RBP11.56□□□□□ -0.56
PTCH1-212ENST00000546744 ATP6V1FQ16864 119 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 H2BFWTQ7Z2G1 175 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 ZNF383Q8NA42 475 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 OR5D18Q8NGL1 313 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 CXCL16Q9H2A7 254 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 BANF2Q9H503 90 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 GOLT1BQ9Y3E0 138 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 CACNA1CQ13936 2221 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 NUP205Q92621 2012 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 IGLV3-16A0A075B6K0 115 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 FGF2P09038 288 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 NPBWR1P48145 328 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 UBE2G1P62253 170 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 CTBSQ01459 385 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 JMJD6Q6NYC1 403 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-212ENST00000546744 TAS1R1Q7RTX1 841 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 LINC00346Q8IVM7 164 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 ZNF596Q8TC21 504 aa11.56□□□□□ -0.56
PTCH1-212ENST00000546744 ATOH1Q92858 354 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms