RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 GNG12Q9UBI6 72 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 UBR3Q6ZT12 1888 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 RAB27BO00194 218 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 NRASP01111 189 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 SUMO3P55854 103 aaPredicted RBP10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 FZD2Q14332 565 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 STPG2Q8N412 459 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 LHFPL5Q8TAF8 219 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 HGDQ93099 445 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 UBL7Q96S82 380 aaPredicted RBP10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 CALHM2Q9HA72 323 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 ERVH48-1M5A8F1 160 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 CYB5BO43169 146 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 TCN2P20062 427 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 DVL1P1P54792 670 aaPredicted RBP10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 ZNF117Q03924 483 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 MIDNQ504T8 468 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 SEZ6L2Q6UXD5 910 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 SERGEFQ9UGK8 458 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 TIMM10BQ9Y5J6 103 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 GCM2O75603 506 aaPredicted RBP10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 RD3LP0DJH9 198 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 HIST1H1DP16402 221 aaKnown RBP10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 GFERP55789 205 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 FOXF1Q12946 379 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 EXT1Q16394 746 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 ZNF425Q6IV72 752 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 OR5M9Q8NGP3 310 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 OR4A16Q8NH70 328 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 ZNF75AQ96N20 296 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 NRTNQ99748 197 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 SUCNR1Q9BXA5 334 aa10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 GAR1Q9NY12 217 aaKnown RBP10.98□□□□□ -0.65
NPC1L1-204ENST00000546276 MBTPS2O43462 519 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 H3F3AP84243 136 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 LTC4SQ16873 150 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 DEGS2Q6QHC5 323 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 CABLES2Q9BTV7 478 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 TOLLIPQ9H0E2 274 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 KCNIP2Q9NS61 270 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 MED9Q9NWA0 146 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 MRPS2Q9Y399 296 aaKnown RBP10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 THSD7AQ9UPZ6 1657 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 BTBD17A6NE02 478 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 DEGS1O15121 323 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 ABOP16442 354 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 THBS4P35443 961 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 HOXA1P49639 335 aaPredicted RBP10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 SNRPEP62304 92 aaKnown RBP10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 GHITMQ9H3K2 345 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 FLRT3Q9NZU0 649 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 RCL1Q9Y2P8 373 aaKnown RBP10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 FAM96BQ9Y3D0 163 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 A6NCN8 305 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 ANKUB1A6NFN9 424 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 FIGNL2A6NMB9 653 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 CT62P0C5K7 136 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 ZNF787Q6DD87 383 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 PRSS54Q6PEW0 395 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 THNSL2Q86YJ6 484 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 FAM185AQ8N0U4 392 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 NOXO1Q8NFA2 376 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 ABHD5Q8WTS1 349 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 MRPL38Q96DV4 380 aaKnown RBP10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 TVP23CQ96ET8 276 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 HIPK2Q9H2X6 1198 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 TMEM218A2RU14 115 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 GP1BAP07359 652 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 RAB32Q13637 225 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 TMEM240Q5SV17 173 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 Q7L0L9 218 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 TRILQ7L0X0 811 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 SYT13Q7L8C5 426 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 C15orf54Q8N8G6 183 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 NPEPL1Q8NDH3 523 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 PP6455Q8WZ26 134 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 REEP6Q96HR9 211 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 C1QTNF6Q9BXI9 259 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 ADAM19Q9H013 955 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 MAGT1Q9H0U3 335 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 PTPRFP10586 1907 aa10.97□□□□□ -0.65
NPC1L1-204ENST00000546276 FAHP16930 419 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 ACKR3P25106 362 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 LIMS1P48059 325 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 ARG2P78540 354 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 DHODHQ02127 395 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 FAHD2BQ6P2I3 314 aaPredicted RBP10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 RPS19BP1Q86WX3 136 aaKnown RBP10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 ZNF784Q8NCA9 323 aaPredicted RBP10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 LHX4Q969G2 390 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 FAHD2AQ96GK7 314 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 PLSCR5A0PG75 271 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 HS3ST1O14792 307 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 SCGB2A1O75556 95 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 SCAF4O95104 1147 aaKnown RBP10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 GABRA2P47869 451 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 THBS3P49746 956 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 INPP5JQ15735 1006 aaPredicted RBP10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 OR2T2Q6IF00 324 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms