RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PSMD9O00233 223 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 EI24O14681 340 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 FOXH1O75593 365 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 FSTL3O95633 263 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 PNPP00491 289 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 PPIAL4FP0DN26 164 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 CPT2P23786 658 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 DCTDP32321 178 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 RBMXP38159 391 aaKnown RBP13.22□□□□□ -0.29
CCDC78-216ENST00000544996 GNALP38405 381 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 ALDH3A2P51648 485 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 POU4F2Q12837 409 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 PRAMEF6Q5VXH4 476 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 RFKQ969G6 155 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 OR8B4Q96RC9 309 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 PATZ1Q9HBE1 687 aaKnown RBP13.22□□□□□ -0.29
CCDC78-216ENST00000544996 ADGRL4Q9HBW9 690 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 S100A14Q9HCY8 104 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 IMPAD1Q9NX62 359 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 USE1Q9NZ43 259 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 ZNF319Q9P2F9 582 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 IKZF2Q9UKS7 526 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 PPIAL4AQ9Y536 164 aa13.22□□□□□ -0.29
CCDC78-216ENST00000544996 JMJD1CQ15652 2540 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 ZNF670-ZNF695F2Z2N8 137 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 FAM20BO75063 409 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 ZNF205O95201 554 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 PTBP3O95758 552 aaKnown RBP13.21□□□□□ -0.29
CCDC78-216ENST00000544996 GATA3P23771 443 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 THBS2P35442 1172 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 ATP6V1E1P36543 226 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 PMELP40967 661 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 RIDAP52758 137 aaKnown RBP13.21□□□□□ -0.29
CCDC78-216ENST00000544996 CXCR4P61073 352 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 MPPED2Q15777 294 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 ZNF829Q3KNS6 432 aaPredicted RBP13.21□□□□□ -0.29
CCDC78-216ENST00000544996 ZNF322Q6U7Q0 402 aaPredicted RBP13.21□□□□□ -0.29
CCDC78-216ENST00000544996 SLC35F2Q8IXU6 374 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 CBR4Q8N4T8 237 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 OR8B12Q8NGG6 310 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 TRUB1Q8WWH5 349 aaKnown RBP13.21□□□□□ -0.29
CCDC78-216ENST00000544996 DVL3Q92997 716 aaPredicted RBP13.21□□□□□ -0.29
CCDC78-216ENST00000544996 C9orf16Q9BUW7 83 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 PAPOLGQ9BWT3 736 aaKnown RBP13.21□□□□□ -0.29
CCDC78-216ENST00000544996 CLN6Q9NWW5 311 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.21□□□□□ -0.29
CCDC78-216ENST00000544996 RNF7Q9UBF6 113 aa13.21□□□□□ -0.29
CCDC78-216ENST00000544996 ANK3Q12955 4377 aaKnown RBP13.2□□□□□ -0.3
CCDC78-216ENST00000544996 MALRD1Q5VYJ5 2156 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 A6NLC8 198 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 ANXA2P2A6NMY6 339 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 CEACAM18A8MTB9 384 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 J3QLI3 93 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 GRPP07492 148 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 RPS2P15880 293 aaKnown RBP13.2□□□□□ -0.3
CCDC78-216ENST00000544996 HTR1FP30939 366 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 LCN2P80188 198 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 EGR3Q06889 387 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 TMED1Q13445 227 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 OR8B8Q15620 311 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 KCNJ8Q15842 424 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 ESCO2Q56NI9 601 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 DCAF12L2Q5VW00 463 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 OR51G2Q8NGK0 314 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 FAM81AQ8TBF8 368 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 STMN2Q93045 179 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 ITFG2Q969R8 447 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 TTTY10Q9BZA0 68 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 TMEM165Q9HC07 324 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 ABCB9Q9NP78 766 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 G6PC2Q9NQR9 355 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 FAM206AQ9NX38 181 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 MIOXQ9UGB7 285 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 COPS3Q9UNS2 423 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 RHBDD3Q9Y3P4 386 aa13.2□□□□□ -0.3
CCDC78-216ENST00000544996 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC78-216ENST00000544996 ABCA2Q9BZC7 2435 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 PPIAL4CA0A0B4J2A2 164 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 A0A0U1RQV5 110 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 hCG_1807616A0A1W2PRN6 198 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 IL5RAQ01344 420 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 SCGB2A2Q13296 93 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 ZIK1Q3SY52 487 aaPredicted RBP13.19□□□□□ -0.3
CCDC78-216ENST00000544996 NLRC3Q7RTR2 1065 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 COMMD2Q86X83 199 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 PQLC1Q8N2U9 271 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 HRASLS5Q96KN8 279 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 MICU1Q9BPX6 476 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 TMEM246Q9BRR3 403 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 PBOV1Q9GZY1 135 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 C1orf123Q9NWV4 160 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 LRCH1Q9Y2L9 728 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 MPC1Q9Y5U8 109 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 TANC2Q9HCD6 1990 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 DYSFO75923 2080 aa13.19□□□□□ -0.3
CCDC78-216ENST00000544996 F5H0A9 414 aaPredicted RBP13.18□□□□□ -0.3
CCDC78-216ENST00000544996 BAG2O95816 211 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 CST4P01036 141 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 KRT8P05787 483 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 WNT2P09544 360 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms