RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TOR2AQ5JU69 321 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 OSR2Q8N2R0 312 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 CPEB3Q8NE35 698 aaKnown RBP11.5□□□□□ -0.57
CHD4-211ENST00000544484 LRP3O75074 770 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 KIR2DL3P43628 341 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 PSMB3P49720 205 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 CDK5Q00535 292 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 IL11RAQ14626 422 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 KHDC1LQ5JSQ8 128 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 ACER2Q5QJU3 275 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 GFRALQ6UXV0 394 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 PATZ1Q9HBE1 687 aaKnown RBP11.5□□□□□ -0.57
CHD4-211ENST00000544484 PDGFAP04085 211 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 C17orf107Q6ZR85 190 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 CISD2Q8N5K1 135 aaKnown RBP11.5□□□□□ -0.57
CHD4-211ENST00000544484 CMTM2Q8TAZ6 248 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 WDR34Q96EX3 536 aa11.5□□□□□ -0.57
CHD4-211ENST00000544484 HSPB2A8KAH6 182 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 TAGLN2P37802 199 aaKnown RBP11.49□□□□□ -0.57
CHD4-211ENST00000544484 HSPB2Q16082 182 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 ZNF766Q5HY98 468 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 WDR38Q5JTN6 314 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 C1orf53Q5VUE5 145 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 THSD4Q6ZMP0 1018 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 MFSD4AQ8N468 514 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 PINX1Q96BK5 328 aaKnown RBP11.49□□□□□ -0.57
CHD4-211ENST00000544484 NDRG3Q9UGV2 375 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 ABCD4O14678 606 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 OR10J4P0C629 311 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 PSMB6P28072 239 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 PIGPP57054 158 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 OR1F12Q8NHA8 337 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 SRRQ9GZT4 340 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 COL4A1P02462 1669 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 ALG1L2C9J202 215 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 SPRY3O43610 288 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 EML2O95834 649 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 ACKR3P25106 362 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 SIRT3Q9NTG7 399 aaPredicted RBP11.49□□□□□ -0.57
CHD4-211ENST00000544484 H2AFB1P0C5Y9 115 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 PCBP3P57721 371 aaKnown RBP11.49□□□□□ -0.57
CHD4-211ENST00000544484 LCN15Q6UWW0 184 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 UBAC2Q8NBM4 344 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 OR2AK2Q8NG84 335 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 MN1Q10571 1320 aaPredicted RBP11.49□□□□□ -0.57
CHD4-211ENST00000544484 PCM1Q15154 2024 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 OIP5O43482 229 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 Q6ZRG5 221 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 TMPRSS7Q7RTY8 843 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 RELL2Q8NC24 303 aaPredicted RBP11.49□□□□□ -0.57
CHD4-211ENST00000544484 FBXO17Q96EF6 278 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 GSX2Q9BZM3 304 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 OSGIN2Q9Y236 505 aa11.49□□□□□ -0.57
CHD4-211ENST00000544484 ZNF724A8MTY0 619 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 TBX19O60806 448 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 PRSS12P56730 875 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 RGS7BPQ6MZT1 257 aaPredicted RBP11.48□□□□□ -0.57
CHD4-211ENST00000544484 C20orf196Q8IYI0 205 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 FBXW5Q969U6 566 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 PELI1Q96FA3 418 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 AKIP1Q9NQ31 210 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 FZR1Q9UM11 496 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 KIAA1217Q5T5P2 1943 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 ZNF354AO60765 605 aaPredicted RBP11.48□□□□□ -0.57
CHD4-211ENST00000544484 RPS2P15880 293 aaKnown RBP11.48□□□□□ -0.57
CHD4-211ENST00000544484 GNB2P62879 340 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 DND1Q8IYX4 353 aaKnown RBP11.48□□□□□ -0.57
CHD4-211ENST00000544484 FBXL14Q8N1E6 418 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 TMEM231Q9H6L2 316 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 STRCP1A6NGW2 1772 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 CDC42EP2O14613 210 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 TIAL1Q01085 375 aaKnown RBP eCLIP11.48□□□□□ -0.571e-9■■■■□ 25.7
CHD4-211ENST00000544484 LINC00303Q3SY05 128 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 ST8SIA4Q92187 359 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 SLC17A2O00624 439 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 PATE4P0C8F1 98 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 CDKN2AP42771 156 aaKnown RBP11.48□□□□□ -0.57
CHD4-211ENST00000544484 HAGHQ16775 308 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 RTN4IP1Q8WWV3 396 aaPredicted RBP11.48□□□□□ -0.57
CHD4-211ENST00000544484 MOGAT1Q96PD6 335 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 TRIP12Q14669 1992 aaPredicted RBP11.48□□□□□ -0.57
CHD4-211ENST00000544484 ZFPL1O95159 310 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 NTN1O95631 604 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 ADRA2CP18825 462 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 ATF1P18846 271 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 S100A7P31151 101 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 MEOX1P50221 254 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 MCCD1P59942 119 aaPredicted RBP11.48□□□□□ -0.57
CHD4-211ENST00000544484 CDC20BQ86Y33 519 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 TSPAN32Q96QS1 320 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 AK3Q9UIJ7 227 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 PAPPAQ13219 1627 aa11.48□□□□□ -0.57
CHD4-211ENST00000544484 POLR2AP24928 1970 aaKnown RBP11.47□□□□□ -0.57
CHD4-211ENST00000544484 TRAV1-2A0A0B4J238 106 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 SPNP16150 400 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 CLDN20P56880 219 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 GSG1Q2KHT4 349 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 TMEM123Q8N131 208 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 FAM186AA6NE01 2351 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 F6UZH7 168 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms