RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 ZNF75AQ96N20 296 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 HS3ST6Q96QI5 342 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 TMEM59Q9BXS4 323 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 DEFB127Q9H1M4 99 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 LHX6Q9UPM6 363 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 ANKRD12Q6UB98 2062 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 IGKV1D-8A0A087WSZ0 117 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 C9orf172C9J069 976 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 MCRIP1C9JLW8 97 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 ZNF587BE7ETH6 402 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 LCATP04180 440 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 ISG15P05161 165 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 TMEM225BP0DP42 221 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 MSX1P28360 303 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 OPRM1P35372 400 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 HLXQ14774 488 aaPredicted RBP3.3□□□□□ -1.88
BRCA2-206ENST00000544455 PCK2Q16822 640 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 SLC25A53Q5H9E4 307 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 PPP1R32Q7Z5V6 425 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 TUSC5Q8IXB3 177 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 TMEM123Q8N131 208 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 TMEM229BQ8NBD8 167 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 AQP3Q92482 292 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 FBXW5Q969U6 566 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 PNPLA2Q96AD5 504 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 SLC26A1Q9H2B4 701 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 NELFAQ9H3P2 528 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 LRFN1Q9P244 771 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 IL36RNQ9UBH0 155 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 KCNN3Q9UGI6 736 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 A0A1W2PNV4 684 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 CER1O95813 267 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 IFNA6P05013 189 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 HPNP05981 417 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 GABRA1P14867 456 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 ZNF32P17041 273 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 HTR5AP47898 357 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 ARFRP1Q13795 201 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 KISS1Q15726 138 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 TSPO2Q5TGU0 170 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 PIGCQ92535 297 aa3.3□□□□□ -1.88
BRCA2-206ENST00000544455 TRAV14DV4A0A0A6YYC5 116 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 MSTNO14793 375 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 MGMTP16455 207 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 BLVRBP30043 206 aaPredicted RBP3.29□□□□□ -1.88
BRCA2-206ENST00000544455 TAS2R19P59542 299 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 IL13RA1P78552 427 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 ELP2Q6IA86 826 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 RAB3CQ96E17 227 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 REEP6Q96HR9 211 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 C1orf147Q96MC9 270 aaPredicted RBP3.29□□□□□ -1.88
BRCA2-206ENST00000544455 MAB21L2Q9Y586 359 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 LIPGQ9Y5X9 500 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 SCN3AQ9NY46 2000 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 NAP1L6A6NFF2 107 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 LRRC3CA6NJW4 275 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 RAG2P55895 527 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 SLC35A1P78382 337 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 CLPPQ16740 277 aaPredicted RBP3.29□□□□□ -1.88
BRCA2-206ENST00000544455 PIGYQ3MUY2 71 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 PXDC1Q5TGL8 231 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 SKA3Q8IX90 412 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 UBALD2Q8IYN6 164 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 LINC00052Q96N35 136 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 PADI1Q9ULC6 663 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 IGKV1-27A0A075B6S5 117 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 CCDC163A0A0D9SF12 145 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 METTL21EPA6NDL7 271 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 LDLRAD4O15165 306 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 PMS2P2O95744 297 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 SCGB1D2O95969 90 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 SFTPBP07988 381 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 GIPP09681 153 aaPredicted RBP3.29□□□□□ -1.88
BRCA2-206ENST00000544455 FSTP19883 344 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 ASCL1P50553 236 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 S100A10P60903 97 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 SEC61A1P61619 476 aaKnown RBP3.29□□□□□ -1.88
BRCA2-206ENST00000544455 PMP22Q01453 160 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 PLGLB1Q02325 96 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 STPG2Q8N412 459 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 PECRQ9BY49 303 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 CKAP5Q14008 2032 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 PLSCR5A0PG75 271 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 DUSP3P51452 185 aaPredicted RBP3.29□□□□□ -1.88
BRCA2-206ENST00000544455 B3GALT5-AS1P59052 145 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 ACTBP60709 375 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 ACTG1P63261 375 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 EXT1Q16394 746 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 C5orf46Q6UWT4 87 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 SPICQ8N5J4 248 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 OR13G1Q8NGZ3 307 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 SGK3Q96BR1 496 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 CMTM3Q96MX0 182 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 PAPOLGQ9BWT3 736 aaKnown RBP3.29□□□□□ -1.88
BRCA2-206ENST00000544455 PCM1Q15154 2024 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 C19orf67A6NJJ6 358 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 RLN2P04090 185 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 HIST1H1DP16402 221 aaKnown RBP3.29□□□□□ -1.88
BRCA2-206ENST00000544455 NAGAP17050 411 aa3.29□□□□□ -1.88
BRCA2-206ENST00000544455 LUMP51884 338 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms