RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 CCDC54Q8NEL0 328 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 OR1M1Q8NGA1 313 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 OR51D1Q8NGF3 324 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 OR1F12Q8NHA8 337 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 FOXRED1Q96CU9 486 aaPredicted RBP10.86□□□□□ -0.67
SMAD3-204ENST00000540846 S100A16Q96FQ6 103 aaKnown RBP10.86□□□□□ -0.67
SMAD3-204ENST00000540846 PGAM5Q96HS1 289 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 NEDD4LQ96PU5 975 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 NEURL2Q9BR09 285 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 TRGV8A0A0C4DH27 118 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 ZNF587BE7ETH6 402 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 F5H5K5 113 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 MMP7P09237 267 aaPredicted RBP10.86□□□□□ -0.67
SMAD3-204ENST00000540846 FAM157BP0CG42 384 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 ZNF32P17041 273 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 CDK2P24941 298 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 HTR2CP28335 458 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 GNALP38405 381 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 UQCRFS1P47985 274 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 SLC6A9P48067 706 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 PTH2RP49190 550 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 CAPZA1P52907 286 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 PER3P56645 1201 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 MRPS10P82664 201 aaKnown RBP10.86□□□□□ -0.67
SMAD3-204ENST00000540846 DGCR2P98153 550 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 IGFBP7Q16270 282 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 TMEM69Q5SWH9 247 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 GLYATL3Q5SZD4 288 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 FBXW9Q5XUX1 488 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 ZNF57Q68EA5 555 aaPredicted RBP10.86□□□□□ -0.67
SMAD3-204ENST00000540846 ZNF774Q6NX45 483 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 ANKRD16Q6P6B7 361 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 ZNF813Q6ZN06 617 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 PGAP1Q75T13 922 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 COMMD2Q86X83 199 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 ZNF100Q8IYN0 542 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 IZUMO1Q8IYV9 350 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 OR5D14Q8NGL3 314 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 ENKURQ8TC29 256 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 C15orf40Q8WUR7 153 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 SFXN3Q9BWM7 321 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 OR2H1Q9GZK4 316 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 WNT5BQ9H1J7 359 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 PLEKHA1Q9HB21 404 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 TMEM138Q9NPI0 162 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 CGGBP1Q9UFW8 167 aaPredicted RBP10.86□□□□□ -0.67
SMAD3-204ENST00000540846 ATPIF1Q9UII2 106 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 TIMM10BQ9Y5J6 103 aa10.86□□□□□ -0.67
SMAD3-204ENST00000540846 FLNCQ14315 2725 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 TMEM272A0A1B0GTI8 110 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 C5orf63A6NC05 138 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 FARS2O95363 451 aaKnown RBP10.85□□□□□ -0.67
SMAD3-204ENST00000540846 CNOT4O95628 575 aaKnown RBP10.85□□□□□ -0.67
SMAD3-204ENST00000540846 IL18BPO95998 194 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 ERCC1P07992 297 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-204ENST00000540846 DBHP09172 617 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 RAB3AP20336 220 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 KIR2DL3P43628 341 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 PSG4Q00888 419 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 PLA2G7Q13093 441 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 C2orf76Q3KRA6 126 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 SLC36A2Q495M3 483 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 SLC16A14Q7RTX9 510 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 NAA40Q86UY6 237 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 LIX1LQ8IVB5 337 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 SKA3Q8IX90 412 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 GABRG1Q8N1C3 465 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 JAGN1Q8N5M9 183 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 RELL2Q8NC24 303 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-204ENST00000540846 OR52H1Q8NGJ2 320 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 OR13C9Q8NGT0 318 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 OR14K1Q8NGZ2 314 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 SLC7A6Q92536 515 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 FAM71F1Q96KD3 344 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-204ENST00000540846 LYZL4Q96KX0 146 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 SORCS2Q96PQ0 1159 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 UQCC2Q9BRT2 126 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 SOX7Q9BT81 388 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 METTL17Q9H7H0 456 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-204ENST00000540846 MRPS7Q9Y2R9 242 aaKnown RBP10.85□□□□□ -0.67
SMAD3-204ENST00000540846 N6AMT1Q9Y5N5 214 aa10.85□□□□□ -0.67
SMAD3-204ENST00000540846 UBR5O95071 2799 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-204ENST00000540846 DIDO1Q9BTC0 2240 aaKnown RBP10.84□□□□□ -0.67
SMAD3-204ENST00000540846 GABARAPH6UMI1 98 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 LDLRAD4O15165 306 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 XRCC3O43542 346 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 CTAG2O75638 210 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 DHRS3O75911 302 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 COX5AP20674 150 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 GNLYP22749 145 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 EFNB2P52799 333 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 TPTEP56180 551 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 TAS2R20P59543 309 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 ARF1P84077 181 aaKnown RBP10.84□□□□□ -0.67
SMAD3-204ENST00000540846 ADORA2A-AS1P86434 159 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 FAPQ12884 760 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 Q6ZT83 130 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 CDH26Q8IXH8 852 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 OR5AS1Q8N127 324 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 ZNF610Q8N9Z0 462 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms