RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 TRDV1A0A1B0GX56 115 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 P2RY10O00398 339 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 PLAUP00749 431 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 CD3EP07766 207 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 ADH4P08319 380 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 UCHL1P09936 223 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 FAM157BP0CG42 384 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 TTKP33981 857 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 THBS4P35443 961 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 MPV17P39210 176 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 RAD52P43351 418 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 EVX1P49640 407 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 FABP5Q01469 135 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 TLE4Q04727 773 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 TRAM1Q15629 374 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 Q499Y3 187 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 ZNF672Q499Z4 452 aaPredicted RBP9.03□□□□□ -0.96
VPS33A-204ENST00000540669 C11orf71Q6IPW1 123 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 ZNF544Q6NX49 715 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 CRIP3Q6Q6R5 217 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 DOK3Q7L591 496 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 DTX2Q86UW9 622 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 ZNF295-AS1Q8N0V1 137 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 MS4A15Q8N5U1 240 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 OR1J1Q8NGS3 322 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 OR5AK2Q8NH90 309 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 GPR148Q8TDV2 347 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 AKAP1Q92667 903 aaKnown RBP eCLIP9.03□□□□□ -0.96
VPS33A-204ENST00000540669 MRPL24Q96A35 216 aaKnown RBP9.03□□□□□ -0.96
VPS33A-204ENST00000540669 HAVCR1Q96D42 359 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 DERL3Q96Q80 235 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 CHST5Q9GZS9 411 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 ZNF275Q9NSD4 429 aaPredicted RBP9.03□□□□□ -0.96
VPS33A-204ENST00000540669 ENPP5Q9UJA9 477 aa9.03□□□□□ -0.96
VPS33A-204ENST00000540669 SPG11Q96JI7 2443 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 PDZD2O15018 2839 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 CD300LBA8K4G0 201 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 GABRPO00591 440 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 LMX1BO60663 402 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 LILRA1O75019 489 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 CTAG2O75638 210 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 GATBO75879 557 aaKnown RBP9.02□□□□□ -0.97
VPS33A-204ENST00000540669 ALX3O95076 343 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 PTBP3O95758 552 aaKnown RBP9.02□□□□□ -0.97
VPS33A-204ENST00000540669 CST4P01036 141 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 RAF1P04049 648 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 DANCRP0C864 163 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 IGFBP3P17936 291 aaPredicted RBP9.02□□□□□ -0.97
VPS33A-204ENST00000540669 CCNOP22674 350 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 CFPP27918 469 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 DDOSTP39656 456 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 GSK3AP49840 483 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 MMP15P51511 669 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 SLC3A1Q07837 685 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 PSG7Q13046 419 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 INSL4Q14641 139 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 HLXQ14774 488 aaPredicted RBP9.02□□□□□ -0.97
VPS33A-204ENST00000540669 CTF1Q16619 201 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 MST1LQ2TV78 715 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 ALKBH6Q3KRA9 238 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 ZMAT1Q5H9K5 638 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 UNQ6126/PRO20091Q6UXV3 157 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 GDPGP1Q6ZNW5 385 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 UTS2BQ765I0 119 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 ANKRD13BQ86YJ7 626 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 RDH10Q8IZV5 341 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 ZNF676Q8N7Q3 588 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 OR56B2PQ8NGI1 322 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 OR5L1Q8NGL2 311 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 PHYHIPQ92561 330 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 THRSPQ92748 146 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 NEUROG1Q92886 237 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 ADAT3Q96EY9 351 aaPredicted RBP9.02□□□□□ -0.97
VPS33A-204ENST00000540669 BCL7BQ9BQE9 202 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 FUNDC2Q9BWH2 189 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 MRPL37Q9BZE1 423 aaKnown RBP9.02□□□□□ -0.97
VPS33A-204ENST00000540669 FGF23Q9GZV9 251 aaPredicted RBP9.02□□□□□ -0.97
VPS33A-204ENST00000540669 COMMD4Q9H0A8 199 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 PPIL3Q9H2H8 161 aaKnown RBP9.02□□□□□ -0.97
VPS33A-204ENST00000540669 BRD7Q9NPI1 651 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 PTTG3PQ9NZH4 202 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 MYEF2Q9P2K5 600 aaKnown RBP9.02□□□□□ -0.97
VPS33A-204ENST00000540669 EIF3KQ9UBQ5 218 aaKnown RBP9.02□□□□□ -0.97
VPS33A-204ENST00000540669 CGGBP1Q9UFW8 167 aaPredicted RBP9.02□□□□□ -0.97
VPS33A-204ENST00000540669 PURGQ9UJV8 347 aaKnown RBP9.02□□□□□ -0.97
VPS33A-204ENST00000540669 RHBDD3Q9Y3P4 386 aa9.02□□□□□ -0.97
VPS33A-204ENST00000540669 A0A1B0GVI7 797 aa9.01□□□□□ -0.97
VPS33A-204ENST00000540669 SHISA3A0PJX4 238 aa9.01□□□□□ -0.97
VPS33A-204ENST00000540669 ZNF879B4DU55 563 aa9.01□□□□□ -0.97
VPS33A-204ENST00000540669 SYT7O43581 403 aa9.01□□□□□ -0.97
VPS33A-204ENST00000540669 ANKRD17O75179 2603 aaKnown RBP9.01□□□□□ -0.97
VPS33A-204ENST00000540669 RGS9O75916 674 aaPredicted RBP9.01□□□□□ -0.97
VPS33A-204ENST00000540669 HLA-DPB1P04440 258 aa9.01□□□□□ -0.97
VPS33A-204ENST00000540669 HSMCR30P0CW71 290 aa9.01□□□□□ -0.97
VPS33A-204ENST00000540669 CD36P16671 472 aa9.01□□□□□ -0.97
VPS33A-204ENST00000540669 ZNF12P17014 697 aa9.01□□□□□ -0.97
VPS33A-204ENST00000540669 GADD45AP24522 165 aa9.01□□□□□ -0.97
VPS33A-204ENST00000540669 MALLQ13021 153 aa9.01□□□□□ -0.97
VPS33A-204ENST00000540669 AKAP6Q13023 2319 aa9.01□□□□□ -0.97
VPS33A-204ENST00000540669 SWI5Q1ZZU3 235 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms