RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SERPINE3A8MV23 424 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 LMO7DNF2Z398 122 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 SIGLEC5O15389 551 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 MPIG6BO95866 241 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 GAPDHP04406 335 aaKnown RBP11.74□□□□□ -0.53
UBE3B-209ENST00000539584 FOLR2P14207 255 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 IL11P20809 199 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 CD38P28907 300 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 BIDP55957 195 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 GABREP78334 506 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 SIGLEC14Q08ET2 396 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 MST1LQ2TV78 715 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 ZNF528Q3MIS6 628 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 PLAC9Q5JTB6 97 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 AVPI1Q5T686 147 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 OR5AS1Q8N127 324 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 POC1AQ8NBT0 407 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 OR10S1Q8NGN2 331 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 OR51E1Q8TCB6 317 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 SSC4DQ8WTU2 575 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 RNF138Q8WVD3 245 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 MICU1Q9BPX6 476 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 RTBDNQ9BSG5 229 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-209ENST00000539584 OR10A2Q9H208 303 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 METTL8Q9H825 291 aaKnown RBP11.74□□□□□ -0.53
UBE3B-209ENST00000539584 PARP11Q9NR21 331 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 SDHAF3Q9NRP4 125 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 C1orf123Q9NWV4 160 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 MED29Q9NX70 200 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 OSGIN2Q9Y236 505 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 CACNA1CQ13936 2221 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 MKI67P46013 3256 aaKnown RBP11.73□□□□□ -0.53
UBE3B-209ENST00000539584 A0A0A6YYD4 124 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 JTBO76095 146 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 CST4P01036 141 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 AMY2BP19961 511 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 CTSSP25774 331 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 CD27P26842 260 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 SULT1A2P50226 295 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 TMEM50BP56557 158 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 CLRN1P58418 232 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 HNRNPKP61978 463 aaKnown RBP eCLIP11.73□□□□□ -0.53
UBE3B-209ENST00000539584 GRB2P62993 217 aaKnown RBP11.73□□□□□ -0.53
UBE3B-209ENST00000539584 SUPT4H1P63272 117 aaKnown RBP11.73□□□□□ -0.53
UBE3B-209ENST00000539584 TMEM88Q6PEY1 159 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 UEVLDQ8IX04 471 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 NOXO1Q8NFA2 376 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 OR1L3Q8NH93 324 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 OR5B2Q96R09 309 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 NICN1Q9BSH3 213 aa11.73□□□□□ -0.53
UBE3B-209ENST00000539584 IGLV3-32A0A0A0MS00 114 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 APOC1P02654 83 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 PRF1P14222 555 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 FOSL2P15408 326 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 NPY4RP50391 375 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 EFNA3P52797 238 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 F2RL1P55085 397 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 B2MP61769 119 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 ECH1Q13011 328 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 ARFRP1Q13795 201 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 ZNF239Q16600 458 aaKnown RBP11.72□□□□□ -0.53
UBE3B-209ENST00000539584 ABHD12BQ7Z5M8 362 aaPredicted RBP11.72□□□□□ -0.53
UBE3B-209ENST00000539584 COMMD1Q8N668 190 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 BOLLQ8N9W6 283 aaKnown RBP11.72□□□□□ -0.53
UBE3B-209ENST00000539584 C10orf35Q96D05 121 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 IFT22Q9H7X7 185 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 TAF9BQ9HBM6 251 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 SLC22A11Q9NSA0 550 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 ASH2LQ9UBL3 628 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 POLR1DQ9Y2S0 133 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 LHFPL6Q9Y693 200 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 FREM3P0C091 2139 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 LOC102725191A0A1B0GVB3 256 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 A0A1W2PR77 199 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 RNASEK-C17orf49H0YIS7 233 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 SOCS1O15524 211 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 CD5P06127 495 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 HCKP08631 526 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 PGA4P0DJD7 388 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 PGA3P0DJD8 388 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 ZNF84P51523 738 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 ZNF41P51814 821 aaPredicted RBP11.72□□□□□ -0.53
UBE3B-209ENST00000539584 AKR1C2P52895 323 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 HTRA3P83110 453 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 AKR1C1Q04828 323 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 GFOD2Q3B7J2 385 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 AADACL3Q5VUY0 350 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 PTCRAQ6ISU1 281 aaPredicted RBP11.72□□□□□ -0.53
UBE3B-209ENST00000539584 TMEM104Q8NE00 496 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 OR6X1Q8NH79 312 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 FOXQ1Q9C009 403 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 PCED1AQ9H1Q7 454 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 SEC61A2Q9H9S3 476 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 RNF122Q9H9V4 155 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 ACKR4Q9NPB9 350 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 B3GAT1Q9P2W7 334 aa11.72□□□□□ -0.53
UBE3B-209ENST00000539584 C14orf166Q9Y224 244 aaKnown RBP11.72□□□□□ -0.53
UBE3B-209ENST00000539584 EPOPA6NHQ4 379 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 RRP8O43159 456 aaKnown RBP11.71□□□□□ -0.53
UBE3B-209ENST00000539584 DUX1O43812 170 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms