RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 C11orf87Q6NUJ2 197 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 TMEM71Q6P5X7 295 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 CD163Q86VB7 1156 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 OR10Z1Q8NGY1 313 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 MITD1Q8WV92 249 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 EMC6Q9BV81 110 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 C1QTNF6Q9BXI9 259 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 KLRF1Q9NZS2 232 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 ZNF230Q9UIE0 474 aaPredicted RBP12.88□□□□□ -0.35
CDCA3-207ENST00000538862 TNFSF18Q9UNG2 199 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 TMEM14DPA8MWL7 114 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 SPDEFO95238 335 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 CHRM2P08172 466 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 EIF1AXP47813 144 aaKnown RBP12.87□□□□□ -0.35
CDCA3-207ENST00000538862 FOXL2P58012 376 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 GABREP78334 506 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 MYBPHQ13203 477 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 NKPD1Q17RQ9 610 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 PLPPR5Q32ZL2 321 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 C3orf33Q6P1S2 294 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 OR2W3Q7Z3T1 314 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 UEVLDQ8IX04 471 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 ST8SIA2Q92186 375 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 SPOCK3Q9BQ16 436 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 DNTTIP1Q9H147 329 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 PTGES2Q9H7Z7 377 aa12.87□□□□□ -0.35
CDCA3-207ENST00000538862 C9orf170A2RU37 121 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 ZNF878C9JN71 531 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 STK17BO94768 372 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 IGHG1P01857 330 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 RLN2P04090 185 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 CSN2P05814 226 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 PNLIPP16233 465 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 CLRN1P58418 232 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 RTP5Q14D33 572 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 C17orf107Q6ZR85 190 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 NOXO1Q8NFA2 376 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 OR10R2Q8NGX6 335 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 OR2AJ1Q8NGZ0 328 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 POC1BQ8TC44 478 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 MRGPRFQ96AM1 343 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 CMBLQ96DG6 245 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 DMRTA2Q96SC8 542 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 WDR77Q9BQA1 342 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-207ENST00000538862 PDCD10Q9BUL8 212 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 IFT46Q9NQC8 304 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 LHFPL6Q9Y693 200 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 PHF3Q92576 2039 aaKnown RBP12.86□□□□□ -0.35
CDCA3-207ENST00000538862 KANTRA0A1W2PQU2 76 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 TLX3O43711 291 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-207ENST00000538862 PGA4P0DJD7 388 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 PGA3P0DJD8 388 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 ZNF20P17024 532 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 ZNF93P35789 620 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-207ENST00000538862 CD96P40200 585 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 PTGDSP41222 190 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 PPP1R1AQ13522 171 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 SHEQ5VZ18 495 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 JMJD6Q6NYC1 403 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-207ENST00000538862 PGAP1Q75T13 922 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 ANGPTL5Q86XS5 388 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 GVQW1Q8N7I0 195 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-207ENST00000538862 SLC38A9Q8NBW4 561 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 OR13C9Q8NGT0 318 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 PHB2Q99623 299 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 MESP1Q9BRJ9 268 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 CST11Q9H112 138 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 RASL12Q9NYN1 266 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 B3GALT1Q9Y5Z6 326 aa12.86□□□□□ -0.35
CDCA3-207ENST00000538862 ZFYVE26Q68DK2 2539 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 SHISA8B8ZZ34 492 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 BCL2L11O43521 198 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 ZFAND5O76080 213 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 ONECUT2O95948 504 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 P2RY4P51582 365 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 EMP2P54851 167 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 IL13RA1P78552 427 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 FOXK1P85037 733 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 TAF13Q15543 124 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 FAM189A2Q15884 450 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 AWAT2Q6E213 333 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 TMEM81Q6P7N7 255 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 SLC25A47Q6Q0C1 308 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 ZNF574Q6ZN55 896 aaPredicted RBP12.85□□□□□ -0.35
CDCA3-207ENST00000538862 CFAP77Q6ZQR2 320 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 ACOT7LQ6ZUV0 252 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 CPEB2Q7Z5Q1 589 aaKnown RBP12.85□□□□□ -0.35
CDCA3-207ENST00000538862 PXT1Q8NFP0 134 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 NUDCD2Q8WVJ2 157 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 PHYHIPLQ96FC7 376 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 SELENOIQ9C0D9 397 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 IFT22Q9H7X7 185 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 HRH3Q9Y5N1 445 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 WIF1Q9Y5W5 379 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 ITPR1Q14643 2758 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 NBEAQ8NFP9 2946 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 AHCTF1Q8WYP5 2266 aa12.85□□□□□ -0.35
CDCA3-207ENST00000538862 IFNA6P05013 189 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 GSTP1P09211 210 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms