RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 PRKAB1Q9Y478 270 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 ZNF726A6NNF4 738 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 CDRT15L2A8MXV6 281 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 HRKO00198 91 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 ERI3O43414 337 aaKnown RBP5.95□□□□□ -1.46
USP28-207ENST00000538475 NKX2-2O95096 273 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 IFNA21P01568 189 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 TK1P04183 234 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 OR8U9P0C7N5 309 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 OR8G3PP0DMU2 310 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 ZNF28P17035 718 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 IL2RGP31785 369 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 FCGR2CP31995 323 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 CD70P32970 193 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 TSPAN7P41732 249 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 ACAA2P42765 397 aaKnown RBP5.95□□□□□ -1.46
USP28-207ENST00000538475 GRK6P43250 576 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 SOX2P48431 317 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 CAMLGP49069 296 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 TNFSF10P50591 281 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 ZNF84P51523 738 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 LINC00310P59036 64 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 TAS2R46P59540 309 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 ERVFRD-1P60508 538 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 ACY1Q03154 408 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 SKP2Q13309 424 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 SLC17A1Q14916 467 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 ELOBQ15370 118 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 USF2Q15853 346 aaPredicted RBP5.95□□□□□ -1.46
USP28-207ENST00000538475 ZNF141Q15928 474 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 DUSP5Q16690 384 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 ZNF674Q2M3X9 581 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 GXYLT1Q4G148 440 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 MIDNQ504T8 468 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 TRMT12Q53H54 448 aaKnown RBP5.95□□□□□ -1.46
USP28-207ENST00000538475 ALG10BQ5I7T1 473 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 DCAF10Q5QP82 559 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 SAPCD1Q5SSQ6 148 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 THEM4Q5T1C6 240 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 FHL5Q5TD97 284 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 GGNBP1Q5YKI7 109 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 METRNLQ641Q3 311 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 RPL7L1Q6DKI1 246 aaKnown RBP5.95□□□□□ -1.46
USP28-207ENST00000538475 OR2A2Q6IF42 318 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 DEGS2Q6QHC5 323 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 SLC25A26Q70HW3 274 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 TRAPPC6BQ86SZ2 158 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 FJX1Q86VR8 437 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 LYPD6Q86Y78 171 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 TGIF2LYQ8IUE0 185 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 ZNF679Q8IYX0 411 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 C1orf87Q8N0U7 546 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 GPR137CQ8N3F9 429 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 LILRA3Q8N6C8 439 aaPredicted RBP5.95□□□□□ -1.46
USP28-207ENST00000538475 FAM169BQ8N8A8 192 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 COX18Q8N8Q8 333 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 PLPP5Q8NEB5 264 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 OR9A2Q8NGT5 310 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 OR6K6Q8NGW6 343 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 OR8U1Q8NH10 309 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 OTOSQ8NHW6 89 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 NT5CQ8TCD5 201 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 WBP2Q969T9 261 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 PPP1R14AQ96A00 147 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 CMBLQ96DG6 245 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 RBMXL1Q96E39 390 aaKnown RBP5.95□□□□□ -1.46
USP28-207ENST00000538475 PACRGQ96M98 296 aaPredicted RBP5.95□□□□□ -1.46
USP28-207ENST00000538475 GNRHR2Q96P88 292 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 SERINC2Q96SA4 455 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 INTS14Q96SY0 518 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 PRRX2Q99811 253 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 KXD1Q9BQD3 176 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 LMF2Q9BU23 707 aaKnown RBP5.95□□□□□ -1.46
USP28-207ENST00000538475 MENTQ9BUN1 341 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 RAB33BQ9H082 229 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 OR2S2Q9NQN1 319 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 SLC23A2Q9UGH3 650 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 HHLA2Q9UM44 414 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 SRPK3Q9UPE1 567 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 TMED7Q9Y3B3 224 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 GOLT1BQ9Y3E0 138 aa5.95□□□□□ -1.46
USP28-207ENST00000538475 CPAMD8Q8IZJ3 1885 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 TRAV1-1A0A0B4J248 108 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 A0A1W2PPE2 198 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 MSGN1A6NI15 193 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 FTCDNL1E5RQL4 147 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 PRAMEF26H0Y7S4 382 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 TOX3O15405 576 aaPredicted RBP5.94□□□□□ -1.46
USP28-207ENST00000538475 DLEU1O43261 78 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 LATO43561 262 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 GPR137BO60478 399 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 DEDDO75618 318 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 NTN1O95631 604 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 MBPP02686 304 aaPredicted RBP5.94□□□□□ -1.46
USP28-207ENST00000538475 OPN1MWP04001 364 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 APODP05090 189 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 HEXBP07686 556 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 FREM3P0C091 2139 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 OPN1MW2P0DN77 364 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 OPN1MW3P0DN78 364 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms