RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 THBS2P35442 1172 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 LGALS4P56470 323 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 RPS23P62266 143 aaKnown RBP6.28□□□□□ -1.4
MSH6-209ENST00000538136 RIPPLY1Q0D2K3 151 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 SCGB2B2Q4G0G5 96 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 AGAP6Q5VW22 663 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 VASH1Q7L8A9 365 aaPredicted RBP6.28□□□□□ -1.4
MSH6-209ENST00000538136 CPEB3Q8NE35 698 aaKnown RBP6.28□□□□□ -1.4
MSH6-209ENST00000538136 OR52I1Q8NGK6 324 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 NEDD4LQ96PU5 975 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 NIPAL2Q9H841 368 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 NOX4Q9NPH5 578 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 SIRT7Q9NRC8 400 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 LRRC30A6NM36 301 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 LGALS8O00214 317 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 GLSO94925 669 aaPredicted RBP6.28□□□□□ -1.4
MSH6-209ENST00000538136 IL18BPO95998 194 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 PGA4P0DJD7 388 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 PGA3P0DJD8 388 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 SRSF2Q01130 221 aaKnown RBP6.28□□□□□ -1.4
MSH6-209ENST00000538136 ATXN7L3Q14CW9 347 aaPredicted RBP6.28□□□□□ -1.4
MSH6-209ENST00000538136 MPPED2Q15777 294 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 NXNL2Q5VZ03 156 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 MARVELD2Q8N4S9 558 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 SF3B5Q9BWJ5 86 aaKnown RBP6.28□□□□□ -1.4
MSH6-209ENST00000538136 WDR13Q9H1Z4 485 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 CELSR2Q9HCU4 2923 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 GLRX2Q9NS18 164 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 BABAM2Q9NXR7 383 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 GNG12Q9UBI6 72 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 GLS2Q9UI32 602 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 EDARQ9UNE0 448 aa6.28□□□□□ -1.4
MSH6-209ENST00000538136 NIPBLQ6KC79 2804 aaeCLIP6.27□□□□□ -1.412e-6■■□□□ 12.2
MSH6-209ENST00000538136 TRIM64A6NGJ6 449 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 TRIM64BA6NI03 449 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 H7C1Q1 480 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 SERPINA5P05154 406 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 MPV17P39210 176 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 MAP2K6P52564 334 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 DLX5P56178 289 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 KRTAP10-9P60411 292 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 NKX6-1P78426 367 aaPredicted RBP6.27□□□□□ -1.41
MSH6-209ENST00000538136 IL18Q14116 193 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 GLYATL3Q5SZD4 288 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 SLX4IPQ5VYV7 408 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 EGFL6Q8IUX8 553 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 SAMD12Q8N8I0 201 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 ITLN2Q8WWU7 325 aaPredicted RBP6.27□□□□□ -1.41
MSH6-209ENST00000538136 APOBEC3DQ96AK3 386 aaPredicted RBP6.27□□□□□ -1.41
MSH6-209ENST00000538136 DIRAS2Q96HU8 199 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 DCAF16Q9NXF7 216 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 IGHV3-43A0A0B4J1X8 118 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 A0A1W2PPE3 182 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 C5orf63A6NC05 138 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 OR6C6A6NF89 314 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 H0YL77 283 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 H3BSA7 217 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 GYPAP02724 150 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 IGHV3-43DP0DP04 118 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 ARF6P62330 175 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 MFGE8Q08431 387 aaPredicted RBP6.27□□□□□ -1.41
MSH6-209ENST00000538136 GABRA6Q16445 453 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 SLC25A35Q3KQZ1 300 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 GDPD3Q7L5L3 318 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 CDC20BQ86Y33 519 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 OR51D1Q8NGF3 324 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 OR5D14Q8NGL3 314 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 KLF14Q8TD94 323 aaPredicted RBP6.27□□□□□ -1.41
MSH6-209ENST00000538136 TOMM40LQ969M1 308 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 CCL13Q99616 98 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 MND1Q9BWT6 205 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 PPA2Q9H2U2 334 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 MEIKINA0A087WXM9 373 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 RLN1P04808 185 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 CLEC2LP0C7M8 214 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 PTHLHP12272 177 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 GADD45AP24522 165 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 RCVRNP35243 200 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 PITPNBP48739 271 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 RPS25P62851 125 aaKnown RBP6.27□□□□□ -1.41
MSH6-209ENST00000538136 ACTC1P68032 377 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 ACTA1P68133 377 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 GPR50Q13585 617 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 OR2B11Q5JQS5 317 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 C16orf87Q6PH81 154 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 SEM1Q6ZVN7 128 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 ZNF679Q8IYX0 411 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 OR13G1Q8NGZ3 307 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 CDCA4Q9BXL8 241 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 DSPPQ9NZW4 1301 aa6.27□□□□□ -1.41
MSH6-209ENST00000538136 WNT9BO14905 357 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 TNFSF13O75888 250 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 SCG5P05408 212 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 HOXD4P09016 255 aaPredicted RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 RAB3AP20336 220 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 OR3A3P47888 321 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 VEGFCP49767 419 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 WNT4P56705 351 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 PLGLAQ15195 96 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 MYPOPQ86VE0 399 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms