RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CHST5Q9GZS9 411 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 ZNF703Q9H7S9 590 aaPredicted RBP11.93□□□□□ -0.5
SMG6-203ENST00000536871 PLEKHA6Q9Y2H5 1048 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 BOLA1Q9Y3E2 137 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 TIMM10BQ9Y5J6 103 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 R4GN57 208 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 F5H5K5 113 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 CD3DP04234 171 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 RFPL3SP0C7P2 107 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 OR1C1Q15619 314 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 MPPED2Q15777 294 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 HYAL4Q2M3T9 481 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 OR5AS1Q8N127 324 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 PAQR4Q8N4S7 273 aaPredicted RBP11.93□□□□□ -0.5
SMG6-203ENST00000536871 OR10Z1Q8NGY1 313 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 SSC4DQ8WTU2 575 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 GPER1Q99527 375 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 DLL4Q9NR61 685 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 FLVCR2Q9UPI3 526 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 HSPB11Q9Y547 144 aa11.93□□□□□ -0.5
SMG6-203ENST00000536871 ALPK2Q86TB3 2170 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 OR6C6A6NF89 314 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 KLRC4-KLRK1H3BQV0 150 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 LRP3O75074 770 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 RGS11O94810 467 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 SYNGR4O95473 234 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 HPXP02790 462 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 ITGB2P05107 769 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 SLC2A1P11166 492 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 HOXB1P14653 301 aaPredicted RBP11.92□□□□□ -0.5
SMG6-203ENST00000536871 ABOP16442 354 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 CRYGSP22914 178 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 DNASE1P24855 282 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 RRADP55042 308 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 B2MP61769 119 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 GUCA2AQ02747 115 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 UNC119Q13432 240 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 GLIPR1L1Q6UWM5 242 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 DHRS13Q6UX07 377 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 LRRC18Q8N456 261 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 STEAP2Q8NFT2 490 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 OR51S1Q8NGJ8 323 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 OR1F12Q8NHA8 337 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 SPSB1Q96BD6 273 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 TECTBQ96PL2 329 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 FOXB1Q99853 325 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 EXO5Q9H790 373 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 CRLF2Q9HC73 371 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 ZNF69Q9UC07 566 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 MCTS1Q9ULC4 181 aaKnown RBP11.92□□□□□ -0.5
SMG6-203ENST00000536871 MGAT4AQ9UM21 535 aa11.92□□□□□ -0.5
SMG6-203ENST00000536871 A0A1W2PNU3 283 aaPredicted RBP11.91□□□□□ -0.5
SMG6-203ENST00000536871 PMS2P1A4D2B8 440 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 PYCARD-AS1I3L0S3 204 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 MASP2O00187 686 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 NDUFA2O43678 99 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 CXCL3P19876 107 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 RAD52P43351 418 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 CLDN15P56746 228 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 PPA1Q15181 289 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 TRIP6Q15654 476 aaKnown RBP11.91□□□□□ -0.5
SMG6-203ENST00000536871 CDNFQ49AH0 187 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 RNASE10Q5GAN6 216 aaKnown RBP11.91□□□□□ -0.5
SMG6-203ENST00000536871 ZBTB37Q5TC79 503 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 SPINK14Q6IE38 97 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 SLC36A1Q7Z2H8 476 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 C9orf62Q8N4C0 152 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 ACBD4Q8NC06 268 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 CHST4Q8NCG5 386 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 BEST4Q8NFU0 473 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 FBXO17Q96EF6 278 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 S100A13Q99584 98 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 TMEM59Q9BXS4 323 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 KCNK15Q9H427 330 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 IFT46Q9NQC8 304 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMG6-203ENST00000536871 ZNF319Q9P2F9 582 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 MGAT4CQ9UBM8 478 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 TUBAL3A6NHL2 446 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 SYNGR3O43761 229 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 OR2A4O95047 310 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 ACTL6AO96019 429 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 RLN1P04808 185 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 CNN3Q15417 329 aaKnown RBP11.91□□□□□ -0.5
SMG6-203ENST00000536871 CSRP2Q16527 193 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 KRTAP27-1Q3LI81 207 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 CHMP1BQ7LBR1 199 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 LURAP1LQ8IV03 231 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 IL22RA1Q8N6P7 574 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 SEMA6DQ8NFY4 1073 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 LILRB1Q8NHL6 650 aaPredicted RBP11.91□□□□□ -0.5
SMG6-203ENST00000536871 OR2A7Q96R45 310 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 KIF26BQ2KJY2 2108 aa11.91□□□□□ -0.5
SMG6-203ENST00000536871 ZDBF2Q9HCK1 2354 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 OR5H15A6NDH6 313 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 TMEM235A6NFC5 223 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 ZNF724A8MTY0 619 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 CDC14BO60729 498 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 MRPL33O75394 65 aaKnown RBP11.9□□□□□ -0.5
SMG6-203ENST00000536871 CA11O75493 328 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms