RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 FOXL2NBQ6ZUU3 175 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 GGNQ86UU5 652 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 GJC3Q8NFK1 279 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 LRRC20Q8TCA0 184 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 AQP3Q92482 292 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 DHRS9Q9BPW9 319 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 DDA1Q9BW61 102 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 NARFLQ9H6Q4 476 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 KLK13Q9UKR3 277 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 KNTC1P50748 2209 aa11.77□□□□□ -0.53
VPS33B-202ENST00000535906 FXYD6-FXYD2A0A087WZ82 144 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 ZSCAN5BA6NJL1 495 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 GJE1A6NN92 205 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 F5H5K5 113 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 B3GALNT1O75752 331 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 BPNT1O95861 308 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 PPP3CBP16298 524 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 CCL1P22362 96 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 STARP49675 285 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 RSPO1Q2MKA7 263 aaPredicted RBP11.76□□□□□ -0.53
VPS33B-202ENST00000535906 ZNF260Q3ZCT1 412 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 DMRTC1Q5HYR2 192 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 PLA2G2CQ5R387 149 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 SFRP5Q5T4F7 317 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 AWAT2Q6E213 333 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 EDEM2Q9BV94 578 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 FXYD6Q9H0Q3 95 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 KCNN3Q9UGI6 736 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 NUP50Q9UKX7 468 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 PINLYPA6NC86 204 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 CYB561P49447 251 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 SUCLG1P53597 346 aaKnown RBP11.76□□□□□ -0.53
VPS33B-202ENST00000535906 CARD18P57730 90 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 WIPI1Q5MNZ9 446 aaPredicted RBP11.76□□□□□ -0.53
VPS33B-202ENST00000535906 DTX1Q86Y01 620 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 NAXDQ8IW45 347 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 BPIFB2Q8N4F0 458 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 C12orf45Q8N5I9 185 aaPredicted RBP11.76□□□□□ -0.53
VPS33B-202ENST00000535906 LYZL4Q96KX0 146 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 ULBP2Q9BZM5 246 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 ARL6Q9H0F7 186 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 RDH8Q9NYR8 311 aa11.76□□□□□ -0.53
VPS33B-202ENST00000535906 TRAPPC6AO75865 159 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 ERCC1P07992 297 aaPredicted RBP11.75□□□□□ -0.53
VPS33B-202ENST00000535906 MEF2DQ14814 521 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 ATPAF1Q5TC12 328 aaPredicted RBP11.75□□□□□ -0.53
VPS33B-202ENST00000535906 SPINK14Q6IE38 97 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 DOK3Q7L591 496 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 TMED4Q7Z7H5 227 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 RTN4RL2Q86UN3 420 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 ZNF584Q8IVC4 421 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 C20orf196Q8IYI0 205 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 OR4S1Q8NGB4 309 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 OR13C8Q8NGS7 320 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 OR14K1Q8NGZ2 314 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 KCNE4Q8WWG9 221 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 RBPMSQ93062 196 aaKnown RBP11.75□□□□□ -0.53
VPS33B-202ENST00000535906 FBXO17Q96EF6 278 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 WBP1Q96G27 269 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 THOC3Q96J01 351 aaKnown RBP11.75□□□□□ -0.53
VPS33B-202ENST00000535906 SF3B5Q9BWJ5 86 aaKnown RBP11.75□□□□□ -0.53
VPS33B-202ENST00000535906 FLVCR1Q9Y5Y0 555 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 IGKV1-9A0A0C4DH69 117 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 TMEM14DPA8MWL7 114 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 CALCRP30988 508 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 SLC6A9P48067 706 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 CLDN15P56746 228 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 HIST1H3AP68431 136 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 RSPO4Q2I0M5 234 aaPredicted RBP11.75□□□□□ -0.53
VPS33B-202ENST00000535906 CDNFQ49AH0 187 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 CLVS2Q5SYC1 327 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 HIST2H3PS2Q5TEC6 136 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 HIST2H3AQ71DI3 136 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 PGAP1Q75T13 922 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 CHST4Q8NCG5 386 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 SCARB1Q8WTV0 552 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 ROBO4Q8WZ75 1007 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 LIN37Q96GY3 246 aaPredicted RBP11.75□□□□□ -0.53
VPS33B-202ENST00000535906 PGAM5Q96HS1 289 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 C1orf147Q96MC9 270 aaPredicted RBP11.75□□□□□ -0.53
VPS33B-202ENST00000535906 SLC6A7Q99884 636 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 NICN1Q9BSH3 213 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 MED9Q9NWA0 146 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 SLC2A8Q9NY64 477 aa11.75□□□□□ -0.53
VPS33B-202ENST00000535906 hCG_1807616A0A1W2PRN6 198 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 RFPL4AA6NLU0 287 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 DISC1C4P0D8 188 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 RFPL4AL1F8VTS6 287 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 DNPH1O43598 174 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 CXCL13O43927 109 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 IGLV3-1P01715 115 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 DBHP09172 617 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 RPA2P15927 270 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 POU3F2P20265 443 aaPredicted RBP11.74□□□□□ -0.53
VPS33B-202ENST00000535906 OR3A4PP47883 348 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 SORDQ00796 357 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 LY6G6FQ5SQ64 297 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 GLIPR1L1Q6UWM5 242 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 GSG1LQ6UXU4 331 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 FJX1Q86VR8 437 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms