RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ZNF391Q9UJN7 358 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 PITPNC1Q9UKF7 332 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 PYCARDQ9ULZ3 195 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 A6NIZ1 184 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 F5H5K5 113 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 SDHDO14521 159 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 POLR3GO15318 223 aaPredicted RBP6.58□□□□□ -1.36
CLIP1-206ENST00000535290 GLCEO94923 617 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 LCATP04180 440 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 LPLP06858 475 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 SNRNP70P08621 437 aaKnown RBP6.58□□□□□ -1.36
CLIP1-206ENST00000535290 ACSM4P0C7M7 580 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 GMFBP60983 142 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 ABCE1P61221 599 aaKnown RBP6.58□□□□□ -1.36
CLIP1-206ENST00000535290 RAP1BP61224 184 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 LSM6P62312 80 aaKnown RBP6.58□□□□□ -1.36
CLIP1-206ENST00000535290 RPL23AP62750 156 aaKnown RBP6.58□□□□□ -1.36
CLIP1-206ENST00000535290 RAP1AP62834 184 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 CKAP4Q07065 602 aaKnown RBP6.58□□□□□ -1.36
CLIP1-206ENST00000535290 KRTAP27-1Q3LI81 207 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 CORO6Q6QEF8 472 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 WDR82Q6UXN9 313 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 LHFPL2Q6ZUX7 228 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 MRPL21Q7Z2W9 205 aaKnown RBP6.58□□□□□ -1.36
CLIP1-206ENST00000535290 OR2W3Q7Z3T1 314 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 FAM185AQ8N0U4 392 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 OR9I1Q8NGQ6 314 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 C12orf43Q96C57 262 aaKnown RBP6.58□□□□□ -1.36
CLIP1-206ENST00000535290 PKNOX2Q96KN3 472 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 GAFA1Q96PS6 74 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 WDR13Q9H1Z4 485 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 IKZF5Q9H5V7 419 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 WDR55Q9H6Y2 383 aaPredicted RBP6.58□□□□□ -1.36
CLIP1-206ENST00000535290 ZMAT4Q9H898 229 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 HEXA-AS1Q9H8Q6 139 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 PNPOQ9NVS9 261 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 SLAMF8Q9P0V8 285 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 RPS6KA6Q9UK32 745 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 ZNF256Q9Y2P7 627 aaPredicted RBP6.58□□□□□ -1.36
CLIP1-206ENST00000535290 NOP16Q9Y3C1 178 aaKnown RBP6.58□□□□□ -1.36
CLIP1-206ENST00000535290 RAP2CQ9Y3L5 183 aa6.58□□□□□ -1.36
CLIP1-206ENST00000535290 SORL1Q92673 2214 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 TEX13CA0A0J9YWL9 993 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 SH2D7A6NKC9 451 aaPredicted RBP6.57□□□□□ -1.36
CLIP1-206ENST00000535290 M0QX08 132 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 IMPA2O14732 288 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 FRMD6-AS1P0C7T7 363 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 VEGFCP49767 419 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 CAV3P56539 151 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 RAB25P57735 213 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 HIST1H3AP68431 136 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 ZNF92Q03936 586 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 TNP2Q05952 138 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 MALLQ13021 153 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 FHL1Q13642 323 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 MEP1BQ16820 701 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 HIST2H3PS2Q5TEC6 136 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 ZNF788Q6ZQV5 615 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 MSANTD1Q6ZTZ1 278 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 HIST2H3AQ71DI3 136 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.57□□□□□ -1.36
CLIP1-206ENST00000535290 ZNF329Q86UD4 541 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 MICU2Q8IYU8 434 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 LNX2Q8N448 690 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 OR51A7Q8NH64 312 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 OR2AE1Q8NHA4 323 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 TMEM239Q8WW34 195 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 DDB2Q92466 427 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 HDHD2Q9H0R4 259 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 RERGLQ9H628 205 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 TMEM38AQ9H6F2 299 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 C19orf12Q9NSK7 152 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 HAO2Q9NYQ3 351 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 MRPL15Q9P015 296 aaKnown RBP6.57□□□□□ -1.36
CLIP1-206ENST00000535290 COA3Q9Y2R0 106 aaPredicted RBP6.57□□□□□ -1.36
CLIP1-206ENST00000535290 LHFPL6Q9Y693 200 aa6.57□□□□□ -1.36
CLIP1-206ENST00000535290 PLECQ15149 4684 aaKnown RBP6.57□□□□□ -1.36
CLIP1-206ENST00000535290 TRAV27A0A087WT01 109 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 GGT3PA6NGU5 568 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 NUDT19A8MXV4 375 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 BHLHE40O14503 412 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 SIGLEC5O15389 551 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 SLC16A7O60669 478 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 CD247P20963 164 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 GGT2P36268 569 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 RBM34P42696 430 aaKnown RBP6.56□□□□□ -1.36
CLIP1-206ENST00000535290 DYNLT3P51808 116 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 POLR2JP52435 117 aaKnown RBP6.56□□□□□ -1.36
CLIP1-206ENST00000535290 SNAI3Q3KNW1 292 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 ABCA11PQ4W5N1 156 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 MESTQ5EB52 335 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 C9orf66Q5T8R8 295 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 ZNF782Q6ZMW2 699 aaPredicted RBP6.56□□□□□ -1.36
CLIP1-206ENST00000535290 GLB1L2Q8IW92 636 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 OSR2Q8N2R0 312 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 GOLGA6L1Q8N7Z2 621 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 GJC3Q8NFK1 279 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 OR1M1Q8NGA1 313 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 OR56B2PQ8NGI1 322 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 OR5K1Q8NHB7 308 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms