RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 CNTD2Q9H8S5 307 aa20.67■□□□□ 0.9
PTPMT1-205ENST00000534775 TNFSF13O75888 250 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 CCNOP22674 350 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 TIMP3P35625 211 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 TDGF1P3P51864 188 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 TMEM69Q5SWH9 247 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 ITFG2Q969R8 447 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 SPSB4Q96A44 273 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 PTX4Q96A99 478 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 APOBEC3DQ96AK3 386 aaPredicted RBP20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 PHF21AQ96BD5 680 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 THAP7Q9BT49 309 aaPredicted RBP20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 NEK6Q9HC98 313 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 DIABLOQ9NR28 239 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 RHBDD3Q9Y3P4 386 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 FAM215AQ9Y5M1 114 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 GTF3C1Q12789 2109 aa20.66■□□□□ 0.9
PTPMT1-205ENST00000534775 CACNA1GO43497 2377 aa20.65■□□□□ 0.9
PTPMT1-205ENST00000534775 hCG_2014768A0A024R1R8 64 aa20.65■□□□□ 0.9
PTPMT1-205ENST00000534775 TMEM272A0A1B0GTI8 110 aa20.65■□□□□ 0.9
PTPMT1-205ENST00000534775 RAD51DO75771 328 aa20.65■□□□□ 0.9
PTPMT1-205ENST00000534775 BPNT1O95861 308 aa20.65■□□□□ 0.9
PTPMT1-205ENST00000534775 SERPINA5P05154 406 aa20.65■□□□□ 0.9
PTPMT1-205ENST00000534775 GABRA6Q16445 453 aa20.65■□□□□ 0.9
PTPMT1-205ENST00000534775 MDP1Q86V88 176 aa20.65■□□□□ 0.9
PTPMT1-205ENST00000534775 OR4D6Q8NGJ1 314 aa20.65■□□□□ 0.9
PTPMT1-205ENST00000534775 STARD4Q96DR4 205 aa20.65■□□□□ 0.9
PTPMT1-205ENST00000534775 hCG_38984A0A1B0GV85 526 aa20.64■□□□□ 0.9
PTPMT1-205ENST00000534775 GSTZ1O43708 216 aaPredicted RBP20.64■□□□□ 0.9
PTPMT1-205ENST00000534775 LYZL6O75951 148 aa20.64■□□□□ 0.9
PTPMT1-205ENST00000534775 EDN3P14138 238 aa20.64■□□□□ 0.9
PTPMT1-205ENST00000534775 PRF1P14222 555 aa20.64■□□□□ 0.9
PTPMT1-205ENST00000534775 CDK2P24941 298 aa20.64■□□□□ 0.9
PTPMT1-205ENST00000534775 HOXC12P31275 282 aa20.64■□□□□ 0.9
PTPMT1-205ENST00000534775 MRPS10P82664 201 aaKnown RBP20.64■□□□□ 0.9
PTPMT1-205ENST00000534775 MALLQ13021 153 aa20.64■□□□□ 0.9
PTPMT1-205ENST00000534775 LINC00303Q3SY05 128 aa20.64■□□□□ 0.9
PTPMT1-205ENST00000534775 IZUMO1Q8IYV9 350 aa20.64■□□□□ 0.9
PTPMT1-205ENST00000534775 FAIMQ9NVQ4 179 aa20.64■□□□□ 0.9
PTPMT1-205ENST00000534775 PRRG2O14669 202 aa20.64■□□□□ 0.89
PTPMT1-205ENST00000534775 XRCC3O43542 346 aa20.64■□□□□ 0.89
PTPMT1-205ENST00000534775 CGAP01215 116 aa20.64■□□□□ 0.89
PTPMT1-205ENST00000534775 RAB6AP20340 208 aa20.64■□□□□ 0.89
PTPMT1-205ENST00000534775 GSK3AP49840 483 aa20.64■□□□□ 0.89
PTPMT1-205ENST00000534775 ZNF92Q03936 586 aa20.64■□□□□ 0.89
PTPMT1-205ENST00000534775 ZNF584Q8IVC4 421 aa20.64■□□□□ 0.89
PTPMT1-205ENST00000534775 GABRG1Q8N1C3 465 aa20.64■□□□□ 0.89
PTPMT1-205ENST00000534775 PNLDC1Q8NA58 520 aaKnown RBP20.64■□□□□ 0.89
PTPMT1-205ENST00000534775 NKX3-1Q99801 234 aaPredicted RBP20.64■□□□□ 0.89
PTPMT1-205ENST00000534775 SLC22A4Q9H015 551 aa20.64■□□□□ 0.89
PTPMT1-205ENST00000534775 TP63Q9H3D4 680 aaPredicted RBP20.64■□□□□ 0.89
PTPMT1-205ENST00000534775 ANKRD11Q6UB99 2663 aaPredicted RBP20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 IGKV1-9A0A0C4DH69 117 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 LDLRAD4O15165 306 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 EEF1E1O43324 174 aaKnown RBP20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 CTAG2O75638 210 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 ACKR3P25106 362 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 FAM3AP98173 230 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 P2RY6Q15077 328 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 OR8B8Q15620 311 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 ZBTB37Q5TC79 503 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 ZNF57Q68EA5 555 aaPredicted RBP20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 BEND4Q6ZU67 534 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 GDPD3Q7L5L3 318 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 TRIM63Q969Q1 353 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 GPER1Q99527 375 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 SLX1AQ9BQ83 275 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 OPA3Q9H6K4 179 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 TBCCD1Q9NVR7 557 aa20.63■□□□□ 0.89
PTPMT1-205ENST00000534775 MGAQ8IWI9 3026 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 LINC00854A0A1B0GVQ3 168 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 TOXO94900 526 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 EFNB2P52799 333 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 TAS2R20P59543 309 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 PLA2G7Q13093 441 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 CNN3Q15417 329 aaKnown RBP20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 UBE2V2Q15819 145 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 TBC1D28Q2M2D7 210 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 AWAT2Q6E213 333 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 MZT2BQ6NZ67 158 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 ANGPTL5Q86XS5 388 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 C17orf78Q8N4C9 275 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 SLC30A7Q8NEW0 376 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 SSC4DQ8WTU2 575 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 SMIM4Q8WVI0 70 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 SPSB1Q96BD6 273 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 CPNE2Q96FN4 548 aaPredicted RBP20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 ATG5Q9H1Y0 275 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 KCNK15Q9H427 330 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 RAB22AQ9UL26 194 aa20.62■□□□□ 0.89
PTPMT1-205ENST00000534775 A0A0A6YYH2 397 aa20.61■□□□□ 0.89
PTPMT1-205ENST00000534775 A6NJ64 397 aa20.61■□□□□ 0.89
PTPMT1-205ENST00000534775 CCL2P13500 99 aa20.61■□□□□ 0.89
PTPMT1-205ENST00000534775 PTH2RP49190 550 aa20.61■□□□□ 0.89
PTPMT1-205ENST00000534775 MRPL49Q13405 166 aaKnown RBP20.61■□□□□ 0.89
PTPMT1-205ENST00000534775 CLVS2Q5SYC1 327 aa20.61■□□□□ 0.89
PTPMT1-205ENST00000534775 ZNF610Q8N9Z0 462 aa20.61■□□□□ 0.89
PTPMT1-205ENST00000534775 ZNF75AQ96N20 296 aa20.61■□□□□ 0.89
PTPMT1-205ENST00000534775 SFXN3Q9BWM7 321 aa20.61■□□□□ 0.89
PTPMT1-205ENST00000534775 FBLN5Q9UBX5 448 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms