RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 NAB1Q13506 487 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 GK3PQ14409 553 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 ZNF266Q14584 549 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 TPD52L1Q16890 204 aaPredicted RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 ZNF829Q3KNS6 432 aaPredicted RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 KRTAP6-1Q3LI64 71 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 HSP90AA5PQ58FG0 334 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 MFSD14CQ5VZR4 134 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 RTL4Q6ZR62 310 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 OTUD6AQ7L8S5 288 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 VN1R4Q7Z5H5 301 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 TMEM144Q7Z5S9 345 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 TMEM150AQ86TG1 271 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 SLC25A45Q8N413 288 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 CBR4Q8N4T8 237 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 RNF10Q8N5U6 811 aaKnown RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 FADS6Q8N9I5 356 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 FAM184AQ8NB25 1140 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 TRPV1Q8NER1 839 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 ENKURQ8TC29 256 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 RXFP4Q8TDU9 374 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 RERGQ96A58 199 aaPredicted RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 HAUS1Q96CS2 278 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 YIPF6Q96EC8 236 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 SLC41A3Q96GZ6 507 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 PLEKHA8Q96JA3 519 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 ZNF514Q96K75 400 aaPredicted RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 FAM111AQ96PZ2 611 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 OR52B2Q96RD2 323 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 KCNK16Q96T55 309 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 FMO2Q99518 471 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 B9D2Q9BPU9 175 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 PIGUQ9H490 435 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 TDRD3Q9H7E2 651 aaKnown RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 PLEKHF2Q9H8W4 249 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 AGPAT4Q9NRZ5 378 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 BABAM2Q9NXR7 383 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 HSPE1-MOB4S4R3N1 261 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 SHANK3Q9BYB0 1731 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 DENND4BO75064 1496 aaPredicted RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 APCP25054 2843 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 NSD1Q96L73 2696 aaPredicted RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 KIF16BQ96L93 1317 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 PCDH11XQ9BZA7 1347 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 LOXHD1Q8IVV2 1947 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 NYNRINQ9P2P1 1898 aaKnown RBP-0.32□□□□□ -2.46
COPB1-212ENST00000534771 IGKV1D-42A0A075B6H8 117 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 GLYATL1P3A0A0U1RQE8 302 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 ZNF729A6NN14 1252 aaPredicted RBP-0.32□□□□□ -2.46
COPB1-212ENST00000534771 ARPC3O15145 178 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 KLHL41O60662 606 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 SMPD2O60906 423 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 OPN1SWP03999 348 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 EPB41P11171 864 aaKnown RBP-0.32□□□□□ -2.46
COPB1-212ENST00000534771 ETS2P15036 469 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 RPA2P15927 270 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 IL32P24001 234 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 CRABP2P29373 138 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 IFNA8P32881 189 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 SSR1P43307 286 aaKnown RBP-0.32□□□□□ -2.46
COPB1-212ENST00000534771 RGS4P49798 205 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 CDH6P55285 790 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 YBEYP58557 167 aaPredicted RBP-0.32□□□□□ -2.46
COPB1-212ENST00000534771 CBX1P83916 185 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 CHIT1Q13231 466 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 SCGB2A2Q13296 93 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 ENDOGQ14249 297 aaKnown RBP-0.32□□□□□ -2.46
COPB1-212ENST00000534771 TNXAQ16473 311 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 EXOC3L2Q2M3D2 409 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 PDZK1Q5T2W1 519 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 C1orf185Q5T7R7 199 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 UBE2UQ5VVX9 321 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 MLIPQ5VWP3 458 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 METAP1DQ6UB28 335 aaPredicted RBP-0.32□□□□□ -2.46
COPB1-212ENST00000534771 UNQ6190/PRO20217Q6UXQ8 127 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 CYHR1Q6ZMK1 362 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 TMPRSS11AQ6ZMR5 421 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 TRMT10CQ7L0Y3 403 aaKnown RBP-0.32□□□□□ -2.46
COPB1-212ENST00000534771 LYZL2Q7Z4W2 148 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 COA5Q86WW8 74 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 PDPNQ86YL7 162 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 HS3ST5Q8IZT8 346 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 FAM83FQ8NEG4 500 aaPredicted RBP-0.32□□□□□ -2.46
COPB1-212ENST00000534771 OR4F6Q8NGB9 312 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 OR52E2Q8NGJ4 325 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 OR1S2Q8NGQ3 325 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 OR51F2Q8NH61 342 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 RNF133Q8WVZ7 376 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 C10orf35Q96D05 121 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 KCNS1Q96KK3 526 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 ODF3Q96PU9 254 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 DERL3Q96Q80 235 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 MTMR9Q96QG7 549 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 OR5B12Q96R08 314 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 COPS8Q99627 209 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 SLIRPQ9GZT3 109 aaKnown RBP-0.32□□□□□ -2.46
COPB1-212ENST00000534771 ANKRD19PQ9H560 264 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 CA10Q9NS85 328 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 ETNK2Q9NVF9 386 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 NAGKQ9UJ70 344 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms