RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 HNRNPCL1O60812 293 aaKnown RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 HNRNPCL4P0DMR1 293 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 MUC1P15941 1255 aaPredicted RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 SPNP16150 400 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 CDH2P19022 906 aaPredicted RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 GLRA1P23415 457 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 CEBPDP49716 269 aaPredicted RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 CRISP1P54107 249 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 PRKCDQ05655 676 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 ILF2Q12905 390 aaKnown RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 PDCD1Q15116 288 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 XAF1Q6GPH4 301 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 HEPN1Q6WQI6 88 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 OR5T2Q8NGG2 359 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 OR13C2Q8NGS9 318 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 RHOVQ96L33 236 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 SSX3Q99909 188 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 WACQ9BTA9 647 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 KCNN2Q9H2S1 579 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 ARGLU1Q9NWB6 273 aaPredicted RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 FAM30AQ9NZY2 134 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 MARCOQ9UEW3 520 aaPredicted RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 GAB2Q9UQC2 676 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 TRAV24A0A0B4J272 114 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 OR7A10O76100 309 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 CSN3P07498 182 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 CD14P08571 375 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 CCDC159P0C7I6 412 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 HTR3AP46098 478 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 PTDSS1P48651 473 aaKnown RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 TRAP1Q12931 704 aaKnown RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 FADDQ13158 208 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 ZNF660Q6AZW8 331 aaPredicted RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 CD300LDQ6UXZ3 194 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 ZNF329Q86UD4 541 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 LILRB2Q8N423 598 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 SMYD1Q8NB12 490 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 RCC1LQ96I51 464 aaKnown RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 RIMS3Q9UJD0 308 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 FKBP7Q9Y680 259 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 C5orf49A4QMS7 147 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 DBX1A6NMT0 343 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 SRRM4A7MD48 611 aaKnown RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 POC1B-GALNT4F8VUJ3 575 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 SLC31A2O15432 143 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 H2AFYO75367 372 aaKnown RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 LALBAP00709 142 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 CD7P09564 240 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 TNFRSF1AP19438 455 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 TUBG1P23258 451 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 PCGF2P35227 344 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 ZNF41P51814 821 aaPredicted RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 ESRRGP62508 458 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 ACTG1P63261 375 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 QRFPP83859 136 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 NPRL3Q12980 569 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 KLF5Q13887 457 aaPredicted RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 C2orf68Q2NKX9 166 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 VPS26BQ4G0F5 336 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 BEND6Q5SZJ8 279 aaPredicted RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 RSBN1Q5VWQ0 802 aaPredicted RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 PGM2L1Q6PCE3 622 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 CATSPERDQ86XM0 798 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 SLC22A9Q8IVM8 553 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 LNX2Q8N448 690 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 POC1AQ8NBT0 407 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 OR51A4Q8NGJ6 313 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 SNX33Q8WV41 574 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 ERGIC1Q969X5 290 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 FANCD2OSQ96PS1 177 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 CCL13Q99616 98 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 GFI1Q99684 422 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 ULBP2Q9BZM5 246 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 MOV10Q9HCE1 1003 aaKnown RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 TUBG2Q9NRH3 451 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 AURKCQ9UQB9 309 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 TRBV4-1A0A0J9YWV2 114 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 EXOC1LA0A1B0GW35 172 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 F8W8V4 182 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 M0QX08 132 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 CDIPTO14735 213 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 UBL3O95164 117 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 IGLV2-23P01705 113 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 SBK2P0C263 348 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 NCF2P19878 526 aaPredicted RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 RBM34P42696 430 aaKnown RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 LGALS4P56470 323 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 HSF2Q03933 536 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 ZNF616Q08AN1 781 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 TSTQ16762 297 aaKnown RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 VMACQ2NL98 169 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 TRMT5Q32P41 509 aaKnown RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 FAM90A2PQ658T7 463 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 LGALS9CQ6DKI2 356 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 GTF2IRD2BQ6EKJ0 949 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 CBLL1Q75N03 491 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 GTF2IRD2Q86UP8 949 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 HAPLN4Q86UW8 402 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 ZNF491Q8N8L2 437 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 ATP6V1C2Q8NEY4 427 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms