RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CD300LBA8K4G0 201 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 E7EQL1 145 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 H7C417 338 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 NOL3O60936 208 aaKnown RBP6.81□□□□□ -1.32
SSBP3-211ENST00000528787 TMEM127O75204 238 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 SRSF10O75494 262 aaKnown RBP6.81□□□□□ -1.32
SSBP3-211ENST00000528787 CYB5AP00167 134 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 CST4P01036 141 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 TTRP02766 147 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 ADH4P08319 380 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 RNF224P0DH78 156 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 SLC2A1P11166 492 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 PSMB9P28065 219 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 GSK3AP49840 483 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 DSCR9P59020 149 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 MRPS11P82912 194 aaKnown RBP6.81□□□□□ -1.32
SSBP3-211ENST00000528787 SNTB1Q13884 538 aaKnown RBP6.81□□□□□ -1.32
SSBP3-211ENST00000528787 TESK1Q15569 626 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 OR8G1Q15617 311 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 FAM189A2Q15884 450 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 RSPO1Q2MKA7 263 aaPredicted RBP6.81□□□□□ -1.32
SSBP3-211ENST00000528787 SNAI3Q3KNW1 292 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 Q499Y3 187 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 ARMCX4Q5H9R4 360 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 WDR38Q5JTN6 314 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 CLVS2Q5SYC1 327 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 GLYATL3Q5SZD4 288 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 OR2G6Q5TZ20 316 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 ZNF787Q6DD87 383 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 DMKNQ6E0U4 476 aaPredicted RBP6.81□□□□□ -1.32
SSBP3-211ENST00000528787 GDPGP1Q6ZNW5 385 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 Q6ZSR3 168 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 C22orf34Q6ZV56 151 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 KCTD8Q6ZWB6 473 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 KRT74Q7RTS7 529 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 PEG10Q86TG7 708 aaKnown RBP6.81□□□□□ -1.32
SSBP3-211ENST00000528787 LSRQ86X29 649 aaPredicted RBP6.81□□□□□ -1.32
SSBP3-211ENST00000528787 ZDHHC23Q8IYP9 409 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 C1orf87Q8N0U7 546 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 PAQR4Q8N4S7 273 aaPredicted RBP6.81□□□□□ -1.32
SSBP3-211ENST00000528787 OR51E1Q8TCB6 317 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 GHSRQ92847 366 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 SPSB1Q96BD6 273 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 SGK3Q96BR1 496 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 FOXRED1Q96CU9 486 aaPredicted RBP6.81□□□□□ -1.32
SSBP3-211ENST00000528787 ZNF649Q9BS31 505 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 TTTY10Q9BZA0 68 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 OR51B6Q9H340 312 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 ISG20L2Q9H9L3 353 aaKnown RBP6.81□□□□□ -1.32
SSBP3-211ENST00000528787 DLL4Q9NR61 685 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 BEX4Q9NWD9 120 aaPredicted RBP6.81□□□□□ -1.32
SSBP3-211ENST00000528787 FRRS1LQ9P0K9 344 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 TAAR3PQ9P1P4 343 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 RTTNQ86VV8 2226 aa6.81□□□□□ -1.32
SSBP3-211ENST00000528787 GCN1Q92616 2671 aaKnown RBP6.8□□□□□ -1.32
SSBP3-211ENST00000528787 LOC107986453A0A1B0GWG9 222 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 OR4C45A6NMZ5 311 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 C17orf100A8MU93 164 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 H3BUI4 141 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 TPD52L2O43399 206 aaKnown RBP6.8□□□□□ -1.32
SSBP3-211ENST00000528787 ZFPL1O95159 310 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 PNPP00491 289 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 NGFP01138 241 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 IGLV3-1P01715 115 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 PSKH1P11801 424 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 IRF2P14316 349 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 JUNBP17275 347 aaPredicted RBP6.8□□□□□ -1.32
SSBP3-211ENST00000528787 ZNF81P51508 661 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 FAM3AP98173 230 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 ZNF92Q03936 586 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 MFGE8Q08431 387 aaPredicted RBP6.8□□□□□ -1.32
SSBP3-211ENST00000528787 PSG7Q13046 419 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 KCNJ8Q15842 424 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 SYT6Q5T7P8 510 aaPredicted RBP6.8□□□□□ -1.32
SSBP3-211ENST00000528787 OTPQ5XKR4 325 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 UTS2BQ765I0 119 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 MYPOPQ86VE0 399 aaPredicted RBP6.8□□□□□ -1.32
SSBP3-211ENST00000528787 CROCCP3Q8IVE0 287 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 CDH26Q8IXH8 852 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 RFLNBQ8N5W9 214 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 NKAIN3Q8N8D7 197 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 PNLDC1Q8NA58 520 aaKnown RBP6.8□□□□□ -1.32
SSBP3-211ENST00000528787 ZNF485Q8NCK3 441 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 DNAAF1Q8NEP3 725 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 OR5A2Q8NGI9 324 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 OR11L1Q8NGX0 322 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 ELMOD3Q96FG2 381 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 FAM71F1Q96KD3 344 aaPredicted RBP6.8□□□□□ -1.32
SSBP3-211ENST00000528787 BCL7BQ9BQE9 202 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 PAPOLGQ9BWT3 736 aaKnown RBP6.8□□□□□ -1.32
SSBP3-211ENST00000528787 PLEKHF2Q9H8W4 249 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 RHOFQ9HBH0 211 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 ZNF275Q9NSD4 429 aaPredicted RBP6.8□□□□□ -1.32
SSBP3-211ENST00000528787 PAK1IP1Q9NWT1 392 aaPredicted RBP6.8□□□□□ -1.32
SSBP3-211ENST00000528787 NDUFB11Q9NX14 153 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 IL19Q9UHD0 177 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 CLEC2DQ9UHP7 191 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 SSR3Q9UNL2 185 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 PIGLQ9Y2B2 252 aa6.8□□□□□ -1.32
SSBP3-211ENST00000528787 POLDIP2Q9Y2S7 368 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms