RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TMEM212A6NML5 194 aa16.04■□□□□ 0.16
LTBP3-210ENST00000528516 SCRG1O75711 98 aa16.04■□□□□ 0.16
LTBP3-210ENST00000528516 STK17BO94768 372 aa16.04■□□□□ 0.16
LTBP3-210ENST00000528516 EPHA1P21709 976 aa16.04■□□□□ 0.16
LTBP3-210ENST00000528516 Q6ZRG5 221 aa16.04■□□□□ 0.16
LTBP3-210ENST00000528516 STACQ99469 402 aa16.04■□□□□ 0.16
LTBP3-210ENST00000528516 PRRT1Q99946 306 aa16.04■□□□□ 0.16
LTBP3-210ENST00000528516 SUCNR1Q9BXA5 334 aa16.04■□□□□ 0.16
LTBP3-210ENST00000528516 LYRM4Q9HD34 91 aa16.04■□□□□ 0.16
LTBP3-210ENST00000528516 YBX2Q9Y2T7 364 aaKnown RBP16.04■□□□□ 0.16
LTBP3-210ENST00000528516 KPTNQ9Y664 436 aa16.04■□□□□ 0.16
LTBP3-210ENST00000528516 PKDREJQ9NTG1 2253 aa16.04■□□□□ 0.16
LTBP3-210ENST00000528516 IGHV3-15A0A0B4J1V0 119 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 IGHV5-51A0A0C4DH38 117 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 LOC100289279A0A1B0GTE1 492 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 BLVRBP30043 206 aaPredicted RBP16.03■□□□□ 0.16
LTBP3-210ENST00000528516 SLC6A8P48029 635 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 BHLHE23Q8NDY6 225 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 ZPLD1Q8TCW7 415 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 ZNRF4Q8WWF5 429 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 DDIT4LQ96D03 193 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 CDC6Q99741 560 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 KCNIP3Q9Y2W7 256 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 PUS1Q9Y606 427 aaKnown RBP eCLIP16.03■□□□□ 0.16
LTBP3-210ENST00000528516 LOC107986453A0A1B0GWG9 222 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 CDAP32320 146 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 MRPS21P82921 87 aaKnown RBP16.03■□□□□ 0.16
LTBP3-210ENST00000528516 C1orf53Q5VUE5 145 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 TMEM244Q5VVB8 128 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 ZNF321PQ8N8H1 164 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 OR51E1Q8TCB6 317 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 IL1F10Q8WWZ1 152 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 B9D1Q9UPM9 204 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 A0A0C4DFX4 3053 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 CXorf65A6NEN9 183 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 TSFMP43897 325 aaKnown RBP16.03■□□□□ 0.16
LTBP3-210ENST00000528516 FAM53BQ14153 422 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 DGAT2L6Q6ZPD8 337 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 SLC16A9Q7RTY1 509 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 OR5L2Q8NGL0 311 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 EDAQ92838 391 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 IP6K3Q96PC2 410 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 WWTR1Q9GZV5 400 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 ALX4Q9H161 411 aaPredicted RBP16.03■□□□□ 0.16
LTBP3-210ENST00000528516 TAF9BQ9HBM6 251 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 C19orf25Q9UFG5 118 aaPredicted RBP16.03■□□□□ 0.16
LTBP3-210ENST00000528516 HIF3AQ9Y2N7 669 aa16.03■□□□□ 0.16
LTBP3-210ENST00000528516 HEXAP06865 529 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 S100GP29377 79 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 PEBP1P30086 187 aaKnown RBP16.02■□□□□ 0.16
LTBP3-210ENST00000528516 HSD11B2P80365 405 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 PMPCAQ10713 525 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 CYB5R2Q6BCY4 276 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 DHRS11Q6UWP2 260 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 OR4K15Q8NH41 348 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 CCDC74AQ96AQ1 378 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 MMP24Q9Y5R2 645 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 ABCA1O95477 2261 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 A0A1W2PPE2 198 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 OR7C1O76099 320 aaPredicted RBP16.02■□□□□ 0.16
LTBP3-210ENST00000528516 SELLP14151 372 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 SUMF1Q8NBK3 374 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 ZNF576Q9H609 170 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 GAR1Q9NY12 217 aaKnown RBP16.02■□□□□ 0.16
LTBP3-210ENST00000528516 PRR13Q9NZ81 148 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 TREM2Q9NZC2 230 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 OR52A1Q9UKL2 312 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 WNK2Q9Y3S1 2297 aa16.02■□□□□ 0.16
LTBP3-210ENST00000528516 TSTD3H0UI37 97 aa16.02■□□□□ 0.15
LTBP3-210ENST00000528516 ZNF217O75362 1048 aa16.02■□□□□ 0.15
LTBP3-210ENST00000528516 PDCD1Q15116 288 aa16.02■□□□□ 0.15
LTBP3-210ENST00000528516 SP7Q8TDD2 431 aaPredicted RBP16.02■□□□□ 0.15
LTBP3-210ENST00000528516 PIGCQ92535 297 aa16.02■□□□□ 0.15
LTBP3-210ENST00000528516 FRRS1LQ9P0K9 344 aa16.02■□□□□ 0.15
LTBP3-210ENST00000528516 SLC5A6Q9Y289 635 aa16.02■□□□□ 0.15
LTBP3-210ENST00000528516 URGCP-MRPS24S4R325 110 aa16.02■□□□□ 0.15
LTBP3-210ENST00000528516 TRAV36DV7A0A075B6V5 113 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 A0A087WV62 115 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 TXNDC12O95881 172 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 OR8U8P0C7N1 319 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 TUBG1P23258 451 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 ZNF93P35789 620 aaPredicted RBP16.01■□□□□ 0.15
LTBP3-210ENST00000528516 CD226Q15762 336 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 STT3BQ8TCJ2 826 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 ROBO4Q8WZ75 1007 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 TMEM74BQ9NUR3 256 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 VSIG4Q9Y279 399 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 C9orf170A2RU37 121 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 CD74P04233 296 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 OR8U9P0C7N5 309 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 FCGR2AP12318 317 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 TCEAL6Q6IPX3 200 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 GPR137CQ8N3F9 429 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 SEMA6DQ8NFY4 1073 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 SEH1LQ96EE3 360 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 KCNJ16Q9NPI9 418 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 UBE2J1Q9Y385 318 aaPredicted RBP16.01■□□□□ 0.15
LTBP3-210ENST00000528516 NOTCH3Q9UM47 2321 aa16.01■□□□□ 0.15
LTBP3-210ENST00000528516 BCAT2O15382 392 aaPredicted RBP16.01■□□□□ 0.15
LTBP3-210ENST00000528516 NME2P1O60361 137 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms