RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 TMEM128Q5BJH2 165 aa11.11□□□□□ -0.63
CAPN1-208ENST00000527323 C1orf189Q5VU69 101 aa11.11□□□□□ -0.63
CAPN1-208ENST00000527323 SLC26A10Q8NG04 563 aa11.11□□□□□ -0.63
CAPN1-208ENST00000527323 ADIPOR1Q96A54 375 aa11.11□□□□□ -0.63
CAPN1-208ENST00000527323 ADAT3Q96EY9 351 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-208ENST00000527323 C5orf34Q96MH7 638 aa11.11□□□□□ -0.63
CAPN1-208ENST00000527323 NMES1Q9C002 83 aa11.11□□□□□ -0.63
CAPN1-208ENST00000527323 FN3KRPQ9HA64 309 aa11.11□□□□□ -0.63
CAPN1-208ENST00000527323 RHOFQ9HBH0 211 aa11.11□□□□□ -0.63
CAPN1-208ENST00000527323 CTSFQ9UBX1 484 aa11.11□□□□□ -0.63
CAPN1-208ENST00000527323 C2orf72A6NCS6 295 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 M0R296 226 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 OR2T1O43869 369 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 ZNF20P17024 532 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 ZNF93P35789 620 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-208ENST00000527323 BLKP51451 505 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 NAAAQ02083 359 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 HLA-BQ31612 363 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 GFOD2Q3B7J2 385 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 TRIM61Q5EBN2 209 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 GUSBP11Q6P575 273 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 PGAP1Q75T13 922 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 BHLHE23Q8NDY6 225 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 CDC6Q99741 560 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 BANF2Q9H503 90 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 CYTL1Q9NRR1 136 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 TMEM100Q9NV29 134 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 MED29Q9NX70 200 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 CARHSP1Q9Y2V2 147 aaKnown RBP11.1□□□□□ -0.63
CAPN1-208ENST00000527323 SPTBN4Q9H254 2564 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 PCNX2A6NKB5 2137 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 ALG1L2C9J202 215 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 SRSF10O75494 262 aaKnown RBP11.1□□□□□ -0.63
CAPN1-208ENST00000527323 SCGB1D2O95969 90 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 CD37P11049 281 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 CFHR1Q03591 330 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 ARFRP1Q13795 201 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 RBM39Q14498 530 aaKnown RBP11.1□□□□□ -0.63
CAPN1-208ENST00000527323 PEA15Q15121 130 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 ZNF528Q3MIS6 628 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 RXFP4Q8TDU9 374 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 GLYATL2Q8WU03 294 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 SEC11CQ9BY50 192 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 PDE7BQ9NP56 450 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 OR5AC2Q9NZP5 309 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 POLR1DQ9Y2S0 133 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 RALGAPA1Q6GYQ0 2036 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 NUDT19A8MXV4 375 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 SSX5O60225 188 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 HTR3BO95264 441 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 NME2P22392 152 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 MPZP25189 248 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 GALNSP34059 522 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 POU3F1Q03052 451 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-208ENST00000527323 NSDHLQ15738 373 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 MICBQ29980 383 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 FAM76BQ5HYJ3 339 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 GLIPR1L1Q6UWM5 242 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 CLEC18BQ6UXF7 455 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 GRINAQ7Z429 371 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 HOGA1Q86XE5 327 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 ST7LQ8TDW4 575 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 OIT3Q8WWZ8 545 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 EMC6Q9BV81 110 aa11.1□□□□□ -0.63
CAPN1-208ENST00000527323 CEP295Q9C0D2 2601 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 IGKV1D-43A0A0B4J1Z2 117 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 A6NIZ1 184 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 APOC1P02654 83 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 SERPINA5P05154 406 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 SFTPBP07988 381 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 HOXB5P09067 269 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 ABOP16442 354 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 OR3A2P47893 321 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 MEOX2P50222 304 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 RAP1BP61224 184 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 HNRNPKP61978 463 aaKnown RBP eCLIP11.09□□□□□ -0.638e-6■■■■□ 20.7
CAPN1-208ENST00000527323 RAP1AP62834 184 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 SHBQ15464 509 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 IL34Q6ZMJ4 242 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 ZNF721Q8TF20 911 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 SLAMF6Q96DU3 332 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 RAB3CQ96E17 227 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 GPER1Q99527 375 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 ST6GALNAC5Q9BVH7 336 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 PBOV1Q9GZY1 135 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 ARRDC1-AS1Q9H2J1 176 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 LANCL2Q9NS86 450 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 COA4Q9NYJ1 87 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 LPAR3Q9UBY5 353 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 SLC5A6Q9Y289 635 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 DBX1A6NMT0 343 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 H0YIG0 161 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 SOCS1O15524 211 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 MED6O75586 246 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 SCGNO76038 276 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 DDAH2O95865 285 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 TTRP02766 147 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 FAM157CP0CG43 387 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 MUC1P15941 1255 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-208ENST00000527323 TBPP20226 339 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms