RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 RGCCQ9H4X1 137 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 SP140LQ9H930 580 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 RHBDD3Q9Y3P4 386 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 ARID1AO14497 2285 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 M0R233 179 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 RGS10O43665 173 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 F12P00748 615 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-205ENST00000527046 HPXP02790 462 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 MT-ND5P03915 603 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 CD55P08174 381 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 COL8A2P25067 703 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 PMELP40967 661 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 WNT4P56705 351 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 EMX1Q04741 257 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-205ENST00000527046 MALLQ13021 153 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 CDK5R1Q15078 307 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 TIGD6Q17RP2 521 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 ODF4Q2M2E3 257 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 CCDC58Q4VC31 144 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 DMRTC1Q5HYR2 192 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 TMEM42Q69YG0 159 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 CRIP3Q6Q6R5 217 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 MRPL21Q7Z2W9 205 aaKnown RBP9.14□□□□□ -0.95
NEDD8-205ENST00000527046 WDR86Q86TI4 376 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 CDH24Q86UP0 819 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 C11orf53Q8IXP5 236 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 SPARTQ8N0X7 666 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 LRRC75A-AS1Q8N1F1 130 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 ZFP41Q8N8Y5 198 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 BHLHE23Q8NDY6 225 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 OR51A4Q8NGJ6 313 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 TPK1Q9H3S4 243 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 MS4A5Q9H3V2 200 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 Q9H521 79 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 MOB1AQ9H8S9 216 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 BEX4Q9NWD9 120 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-205ENST00000527046 NKIRAS2Q9NYR9 191 aa9.14□□□□□ -0.95
NEDD8-205ENST00000527046 LOC100289279A0A1B0GTE1 492 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 A0A1W2PPW3 197 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 A6NIN4 97 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 LYNX1G3V0Z9 82 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 H3BSH0 61 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 SPRY3O43610 288 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 PLPP2O43688 288 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 TIMM8AO60220 97 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-205ENST00000527046 DHRS3O75911 302 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 PTBP3O95758 552 aaKnown RBP9.13□□□□□ -0.95
NEDD8-205ENST00000527046 CST4P01036 141 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 LYNX1P0DP58 116 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 SELEP16581 610 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 MYL12AP19105 171 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 CA6P23280 308 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 DNASE1P24855 282 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 DDOSTP39656 456 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 ZNF81P51508 661 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 GBX2P52951 348 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-205ENST00000527046 GABARAPL2P60520 117 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 SNRPD2P62316 118 aaKnown RBP9.13□□□□□ -0.95
NEDD8-205ENST00000527046 CCL8P80075 99 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 GFOD2Q3B7J2 385 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 BCL2L15Q5TBC7 163 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 RPL22L1Q6P5R6 122 aaKnown RBP9.13□□□□□ -0.95
NEDD8-205ENST00000527046 TMPRSS11AQ6ZMR5 421 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 UBASH3BQ8TF42 649 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 DVL3Q92997 716 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-205ENST00000527046 YIPF5Q969M3 257 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 ADAT3Q96EY9 351 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-205ENST00000527046 FAM71F1Q96KD3 344 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-205ENST00000527046 VRK1Q99986 396 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-205ENST00000527046 OPA3Q9H6K4 179 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 ACOT13Q9NPJ3 140 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 DCAF16Q9NXF7 216 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 MRPL15Q9P015 296 aaKnown RBP9.13□□□□□ -0.95
NEDD8-205ENST00000527046 ZNF391Q9UJN7 358 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 SF3B6Q9Y3B4 125 aaKnown RBP9.13□□□□□ -0.95
NEDD8-205ENST00000527046 CACNG2Q9Y698 323 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 PMF1-BGLAPU3KQ54 211 aa9.13□□□□□ -0.95
NEDD8-205ENST00000527046 LOC107986453A0A1B0GWG9 222 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 GGT3PA6NGU5 568 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 TRIM64CA6NLI5 447 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 F5H5P2 479 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 MRPS14O60783 128 aaKnown RBP9.12□□□□□ -0.95
NEDD8-205ENST00000527046 RP2O75695 350 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 CD1AP06126 327 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 ATP6V1B1P15313 513 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 FAHP16930 419 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 LIPAP38571 399 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 EFNA4P52798 201 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 MRPL28Q13084 256 aaKnown RBP9.12□□□□□ -0.95
NEDD8-205ENST00000527046 SPHARQ15513 63 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 MOGQ16653 247 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 TSTQ16762 297 aaKnown RBP9.12□□□□□ -0.95
NEDD8-205ENST00000527046 NKPD1Q17RQ9 610 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 FAM76BQ5HYJ3 339 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 DOK3Q7L591 496 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 RNF144BQ7Z419 303 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 FAM220AQ7Z4H9 259 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 OR10AD1Q8NGE0 317 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 OR13G1Q8NGZ3 307 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 HPSE2Q8WWQ2 592 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms