RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 TBX21Q9UL17 535 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 SCML2Q9UQR0 700 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 ALPK3Q96L96 1907 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 NPIPA5A0A0B4J1W7 369 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 FIGNL2A6NMB9 653 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 ZNF705FA8MVS1 300 aaPredicted RBP7.41□□□□□ -1.22
HMGB4-204ENST00000522796 NPIPA5E9PKD4 350 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 NPIPA3F8WFD2 350 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 XKRYO14609 159 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 FGF17O60258 216 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 ZNF705DP0CH99 300 aaPredicted RBP7.41□□□□□ -1.22
HMGB4-204ENST00000522796 ZNF705BP0CI00 300 aaPredicted RBP7.41□□□□□ -1.22
HMGB4-204ENST00000522796 IMPA1P29218 277 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 GLIPR1P48060 266 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 SLC6A11P48066 632 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 ATP1B3P54709 279 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 ZFP36L1Q07352 338 aaKnown RBP7.41□□□□□ -1.22
HMGB4-204ENST00000522796 PRDX4Q13162 271 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 PTPRNQ16849 979 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 TDRG1Q3Y452 100 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 LRRC37A5PQ49AS3 106 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 SYT14P1Q58G82 188 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 TMPRSS11BQ86T26 416 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 TMEM130Q8N3G9 435 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 FAM174AQ8TBP5 190 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 SLC35G5Q96KT7 338 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 OR6C1Q96RD1 312 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 LRFN3Q9BTN0 628 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 DPY30Q9C005 99 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 KATNBL1Q9H079 304 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 RDH14Q9HBH5 336 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 ZNF319Q9P2F9 582 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 SLC45A2Q9UMX9 530 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 NPIPA1Q9UND3 350 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 NTNG1Q9Y2I2 539 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 TRBV6-7A0A0A0MS04 114 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.4□□□□□ -1.22
HMGB4-204ENST00000522796 GXYLT2A0PJZ3 443 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 PCDH7O60245 1069 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 RAMP1O60894 148 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 PPP1R11O60927 126 aaPredicted RBP7.4□□□□□ -1.22
HMGB4-204ENST00000522796 TOX4O94842 621 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 AZU1P20160 251 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 SLC6A6P31641 620 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 OTX2P32243 289 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 CDKN1AP38936 164 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 EGR4Q05215 589 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 VAMP3Q15836 100 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 PCK2Q16822 640 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 UNQ5815/PRO19632Q6UWF5 114 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 Q6ZRG5 221 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 DEFB128Q7Z7B8 93 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 C17orf64Q86WR6 236 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 SIRT6Q8N6T7 355 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 SLC26A10Q8NG04 563 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 OR4X1Q8NH49 305 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 OR5AK2Q8NH90 309 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 SLC25A43Q8WUT9 341 aaPredicted RBP7.4□□□□□ -1.22
HMGB4-204ENST00000522796 ZNF582Q96NG8 517 aaPredicted RBP7.4□□□□□ -1.22
HMGB4-204ENST00000522796 MARCH2Q9P0N8 246 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 KLK11Q9UBX7 282 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 TRIP11Q15643 1979 aa7.4□□□□□ -1.22
HMGB4-204ENST00000522796 A0A1B0GU03 582 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 CTSDP07339 412 aaPredicted RBP7.4□□□□□ -1.23
HMGB4-204ENST00000522796 ZNF865P0CJ78 1059 aaPredicted RBP7.4□□□□□ -1.23
HMGB4-204ENST00000522796 AREGP15514 252 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 KITLGP21583 273 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 SERPINA4P29622 427 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 TBPL1P62380 186 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 GNMTQ14749 295 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 RGNQ15493 299 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 SLC25A35Q3KQZ1 300 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 FAM102AQ5T9C2 384 aaPredicted RBP7.4□□□□□ -1.23
HMGB4-204ENST00000522796 HECTD2Q5U5R9 776 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 RPL22L1Q6P5R6 122 aaKnown RBP7.4□□□□□ -1.23
HMGB4-204ENST00000522796 LCTLQ6UWM7 567 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 TMEM182Q6ZP80 229 aaPredicted RBP7.4□□□□□ -1.23
HMGB4-204ENST00000522796 BCDIN3DQ7Z5W3 292 aaKnown RBP7.4□□□□□ -1.23
HMGB4-204ENST00000522796 UBALD2Q8IYN6 164 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 BATF2Q8N1L9 274 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 COX18Q8N8Q8 333 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 C15orf40Q8WUR7 153 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 C12orf42Q96LP6 360 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 TRIB1Q96RU8 372 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 ASCL2Q99929 193 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 SGIP1Q9BQI5 828 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 SLC46A2Q9BY10 475 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 EIF5A2Q9GZV4 153 aaKnown RBP7.4□□□□□ -1.23
HMGB4-204ENST00000522796 PPIAL4AQ9Y536 164 aa7.4□□□□□ -1.23
HMGB4-204ENST00000522796 LY75O60449 1722 aa7.39□□□□□ -1.23
HMGB4-204ENST00000522796 FNDC1Q4ZHG4 1894 aaPredicted RBP7.39□□□□□ -1.23
HMGB4-204ENST00000522796 TRBV24-1A0A075B6N3 115 aa7.39□□□□□ -1.23
HMGB4-204ENST00000522796 A0A1B0GW64 132 aa7.39□□□□□ -1.23
HMGB4-204ENST00000522796 LRP3O75074 770 aa7.39□□□□□ -1.23
HMGB4-204ENST00000522796 NME6O75414 186 aaPredicted RBP7.39□□□□□ -1.23
HMGB4-204ENST00000522796 GPANK1O95872 356 aa7.39□□□□□ -1.23
HMGB4-204ENST00000522796 GASTP01350 101 aa7.39□□□□□ -1.23
HMGB4-204ENST00000522796 IL3P08700 152 aa7.39□□□□□ -1.23
HMGB4-204ENST00000522796 FAM87AP0C7U9 286 aa7.39□□□□□ -1.23
HMGB4-204ENST00000522796 SNRPBP14678 240 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms