RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 SOX15O60248 233 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 NDUFB8O95169 186 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 SEMA4FO95754 770 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 RPLP0P05388 317 aaKnown RBP6.29□□□□□ -1.4
CLK4-202ENST00000519132 SCGB1A1P11684 91 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 ANXA3P12429 323 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 NAAAQ02083 359 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 ZNF181Q2M3W8 571 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 SLC22A6Q4U2R8 563 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 FAM74A3Q4VXF1 159 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 AVPI1Q5T686 147 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 TEX261Q6UWH6 196 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 CPEB2Q7Z5Q1 589 aaKnown RBP6.29□□□□□ -1.4
CLK4-202ENST00000519132 OR13D1Q8NGV5 346 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 AKR1E2Q96JD6 320 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 ZNF426Q9BUY5 554 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 ZNF703Q9H7S9 590 aaPredicted RBP6.29□□□□□ -1.4
CLK4-202ENST00000519132 FKRPQ9H9S5 495 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 MED9Q9NWA0 146 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 GALPQ9UBC7 116 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 U3KQ87 197 aa6.29□□□□□ -1.4
CLK4-202ENST00000519132 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 DLGAP1O14490 977 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 CLDN9O95484 217 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 SLC35G4P0C7Q5 338 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 PDLIM4P50479 330 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 KLF3P57682 345 aaPredicted RBP6.28□□□□□ -1.4
CLK4-202ENST00000519132 RAB5BP61020 215 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 EXOSC7Q15024 291 aaKnown RBP6.28□□□□□ -1.4
CLK4-202ENST00000519132 SMIM21Q3B7S5 101 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 ASCL4Q6XD76 172 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 STAG3L4Q8TBR4 150 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 PPWD1Q96BP3 646 aaKnown RBP6.28□□□□□ -1.4
CLK4-202ENST00000519132 SUCNR1Q9BXA5 334 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 OSBPL11Q9BXB4 747 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 COMMD4Q9H0A8 199 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 DCSTAMPQ9H295 470 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 MTHFD2LQ9H903 347 aaPredicted RBP6.28□□□□□ -1.4
CLK4-202ENST00000519132 CXorf21Q9HAI6 301 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 POLE4Q9NR33 117 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 C2orf42Q9NWW7 574 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 TNRC6BQ9UPQ9 1833 aaKnown RBP6.28□□□□□ -1.4
CLK4-202ENST00000519132 TRBV11-1A0A0K0K1C0 115 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 TXNDC12O95881 172 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 MPC1LP0DKB6 136 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 TAC1P20366 129 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 ADARB1P78563 741 aaKnown RBP6.28□□□□□ -1.4
CLK4-202ENST00000519132 HNRNPA0Q13151 305 aaKnown RBP6.28□□□□□ -1.4
CLK4-202ENST00000519132 ZNF548Q8NEK5 533 aaPredicted RBP6.28□□□□□ -1.4
CLK4-202ENST00000519132 OR2M7Q8NG81 312 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 WBP1Q96G27 269 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 ATOH8Q96SQ7 321 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 PHB2Q99623 299 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 GPR83Q9NYM4 423 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 SLC17A4Q9Y2C5 497 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 IGHV1OR15-9A0A0B4J2B8 117 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 A8MXK9 166 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 DISC1C4P0D8 188 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 PROB1E7EW31 1015 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 H0YL77 283 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 BHLHE40O14503 412 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 IMPA2O14732 288 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 DUX1O43812 170 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 IGHV4-34P06331 123 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 ADORA3P0DMS8 318 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 MYL2P10916 166 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 CPN1P15169 458 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 CXCL12P48061 93 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 SELENOPP49908 381 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 TDGF1P3P51864 188 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 TMBIM6P55061 237 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 RAG2P55895 527 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 PROK1P58294 105 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 PFN3P60673 137 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 SSBP2P81877 361 aaPredicted RBP6.28□□□□□ -1.4
CLK4-202ENST00000519132 ZNF616Q08AN1 781 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 PJVKQ0ZLH3 352 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 TMEM64Q6YI46 380 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 CALHM1Q8IU99 346 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 AQP11Q8NBQ7 271 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 OR6K3Q8NGY3 331 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 EEF1AKMT1Q8WVE0 214 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 RNF133Q8WVZ7 376 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 C11orf40Q8WZ69 217 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 RAB39BQ96DA2 213 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 TSSK2Q96PF2 358 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 DUX5Q96PT3 197 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 TSNAXQ99598 290 aaKnown RBP6.28□□□□□ -1.4
CLK4-202ENST00000519132 CHRDL1Q9BU40 450 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 QTRT1Q9BXR0 403 aaKnown RBP6.28□□□□□ -1.4
CLK4-202ENST00000519132 RDH14Q9HBH5 336 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 USE1Q9NZ43 259 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 MED11Q9P086 117 aa6.28□□□□□ -1.4
CLK4-202ENST00000519132 PRPF19Q9UMS4 504 aaKnown RBP6.28□□□□□ -1.4
CLK4-202ENST00000519132 A0A087WXM4 84 aa6.27□□□□□ -1.41
CLK4-202ENST00000519132 ZNF732B4DXR9 585 aa6.27□□□□□ -1.41
CLK4-202ENST00000519132 UPK1BO75841 260 aa6.27□□□□□ -1.41
CLK4-202ENST00000519132 FGF3P11487 239 aaPredicted RBP6.27□□□□□ -1.41
CLK4-202ENST00000519132 AOC1P19801 751 aa6.27□□□□□ -1.41
CLK4-202ENST00000519132 CCL7P80098 99 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms