RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PNMA8CA0A1B0GUJ8 204 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 GGT3PA6NGU5 568 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 CD300LBA8K4G0 201 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 B9A039 149 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 CLPTM1O96005 669 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 MAP2K3P46734 347 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 YIF1BQ5BJH7 314 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 ZBTB37Q5TC79 503 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 LIPKQ5VXJ0 399 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 ZNF787Q6DD87 383 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 OR2T2Q6IF00 324 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 C20orf204Q6ZNR8 217 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 PHC2Q8IXK0 858 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 CSNK2A3Q8NEV1 391 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 RGP1Q92546 391 aaPredicted RBP17.96■□□□□ 0.47
LSM6-207ENST00000515311 GPR160Q9UJ42 338 aa17.96■□□□□ 0.47
LSM6-207ENST00000515311 FBXO9Q9UK97 447 aaPredicted RBP17.96■□□□□ 0.47
LSM6-207ENST00000515311 HECTD1Q9ULT8 2610 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 TIMM8AO60220 97 aaPredicted RBP17.95■□□□□ 0.46
LSM6-207ENST00000515311 DANCRP0C864 163 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 GP2P55259 537 aaKnown RBP17.95■□□□□ 0.46
LSM6-207ENST00000515311 TNK1Q13470 666 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 TSTQ16762 297 aaKnown RBP17.95■□□□□ 0.46
LSM6-207ENST00000515311 MST1LQ2TV78 715 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 AGAP6Q5VW22 663 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 HIST2H2BCQ6DN03 193 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 DTX2Q86UW9 622 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 FTMTQ8N4E7 242 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 MS4A15Q8N5U1 240 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 SEMA6DQ8NFY4 1073 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 OR56B2PQ8NGI1 322 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 OR14K1Q8NGZ2 314 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 GPR148Q8TDV2 347 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 SOX7Q9BT81 388 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 NDUFB11Q9NX14 153 aa17.95■□□□□ 0.46
LSM6-207ENST00000515311 MYEF2Q9P2K5 600 aaKnown RBP17.95■□□□□ 0.46
LSM6-207ENST00000515311 A0A1W2PPW3 197 aa17.94■□□□□ 0.46
LSM6-207ENST00000515311 ACKR3P25106 362 aa17.94■□□□□ 0.46
LSM6-207ENST00000515311 PSMA1P25786 263 aaKnown RBP17.94■□□□□ 0.46
LSM6-207ENST00000515311 LIPAP38571 399 aa17.94■□□□□ 0.46
LSM6-207ENST00000515311 PRSS12P56730 875 aa17.94■□□□□ 0.46
LSM6-207ENST00000515311 RPS11P62280 158 aaKnown RBP eCLIP17.94■□□□□ 0.46
LSM6-207ENST00000515311 RIPPLY1Q0D2K3 151 aa17.94■□□□□ 0.46
LSM6-207ENST00000515311 TRAM1Q15629 374 aa17.94■□□□□ 0.46
LSM6-207ENST00000515311 SWI5Q1ZZU3 235 aa17.94■□□□□ 0.46
LSM6-207ENST00000515311 KRT74Q7RTS7 529 aa17.94■□□□□ 0.46
LSM6-207ENST00000515311 OR10AC1Q8NH08 325 aa17.94■□□□□ 0.46
LSM6-207ENST00000515311 C10orf35Q96D05 121 aa17.94■□□□□ 0.46
LSM6-207ENST00000515311 CYSLTR2Q9NS75 346 aa17.94■□□□□ 0.46
LSM6-207ENST00000515311 CBLN4Q9NTU7 201 aa17.94■□□□□ 0.46
LSM6-207ENST00000515311 MRPL15Q9P015 296 aaKnown RBP17.94■□□□□ 0.46
LSM6-207ENST00000515311 A0A1B0GWJ7 208 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 PLSCR5A0PG75 271 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 CCRL2O00421 344 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 GABRA5P31644 462 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 MMP15P51511 669 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 SNRPD2P62316 118 aaKnown RBP17.93■□□□□ 0.46
LSM6-207ENST00000515311 SSX1Q16384 188 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 ALKBH6Q3KRA9 238 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 ZMAT1Q5H9K5 638 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 BHLHE23Q8NDY6 225 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 OR8G5Q8NG78 346 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 OR51A4Q8NGJ6 313 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 OR13C3Q8NGS6 347 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 THRSPQ92748 146 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 PLEKHA1Q9HB21 404 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 ZNF275Q9NSD4 429 aaPredicted RBP17.93■□□□□ 0.46
LSM6-207ENST00000515311 TAAR3PQ9P1P4 343 aa17.93■□□□□ 0.46
LSM6-207ENST00000515311 TACC2O95359 2948 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 UNC79Q9P2D8 2635 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 TRBV5-5A0A0J9YX44 114 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 ZNF816-ZNF321PA0A0X1KG74 233 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 M0R233 179 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 SOD3P08294 240 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 NKPD1Q17RQ9 610 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 C11orf71Q6IPW1 123 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 OR5AS1Q8N127 324 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 TSEN15Q8WW01 171 aaKnown RBP17.92■□□□□ 0.46
LSM6-207ENST00000515311 SLC30A2Q9BRI3 323 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 TRAF4Q9BUZ4 470 aaPredicted RBP17.92■□□□□ 0.46
LSM6-207ENST00000515311 TMED9Q9BVK6 235 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 SLC22A4Q9H015 551 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 SCOCQ9UIL1 159 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 ENPP5Q9UJA9 477 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 DHDHQ9UQ10 334 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 PIGLQ9Y2B2 252 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 SF3B6Q9Y3B4 125 aaKnown RBP17.92■□□□□ 0.46
LSM6-207ENST00000515311 FBN2P35556 2912 aa17.92■□□□□ 0.46
LSM6-207ENST00000515311 DSCAMO60469 2012 aa17.91■□□□□ 0.46
LSM6-207ENST00000515311 ANKRD30BLA7E2S9 258 aa17.91■□□□□ 0.46
LSM6-207ENST00000515311 H3BSH0 61 aa17.91■□□□□ 0.46
LSM6-207ENST00000515311 LILRA1O75019 489 aa17.91■□□□□ 0.46
LSM6-207ENST00000515311 SERPINA3P01011 423 aa17.91■□□□□ 0.46
LSM6-207ENST00000515311 CST4P01036 141 aa17.91■□□□□ 0.46
LSM6-207ENST00000515311 CD8AP01732 235 aa17.91■□□□□ 0.46
LSM6-207ENST00000515311 OCM2P0CE71 109 aa17.91■□□□□ 0.46
LSM6-207ENST00000515311 BMP4P12644 408 aa17.91■□□□□ 0.46
LSM6-207ENST00000515311 FAHP16930 419 aa17.91■□□□□ 0.46
LSM6-207ENST00000515311 Q499Y3 187 aa17.91■□□□□ 0.46
LSM6-207ENST00000515311 OR13G1Q8NGZ3 307 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms