RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 ZMYND19Q96E35 227 aaPredicted RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 FBXO17Q96EF6 278 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ARSGQ96EG1 525 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 S100A16Q96FQ6 103 aaKnown RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 GPR137Q96N19 417 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 DERL3Q96Q80 235 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ABHD1Q96SE0 405 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 TBX5Q99593 518 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 MAP3K3Q99759 626 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 SLX1AQ9BQ83 275 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ALG12Q9BV10 488 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 LRRC61Q9BV99 259 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 CACNG6Q9BXT2 260 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 PPIL3Q9H2H8 161 aaKnown RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 OR51J1Q9H342 316 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 PLK3Q9H4B4 646 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 WDR76Q9H967 626 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 TMEM165Q9HC07 324 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 SDF2L1Q9HCN8 221 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 MMP25Q9NPA2 562 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 KLHL1Q9NR64 748 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 TAS2R8Q9NYW2 309 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 KLHL9Q9P2J3 617 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ZNF107Q9UII5 783 aaPredicted RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 SCP2D1Q9UJQ7 156 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 FBXL2Q9UKC9 423 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 ELF5Q9UKW6 265 aaPredicted RBP3.28□□□□□ -1.88
CAST-242ENST00000515063 ERVK-19Q9WJR5 959 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 CA5BQ9Y2D0 317 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 OR10H1Q9Y4A9 318 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 EML5Q05BV3 1969 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 F5P12259 2224 aa3.28□□□□□ -1.88
CAST-242ENST00000515063 BRCA2P51587 3418 aa3.28□□□□□ -1.89
CAST-242ENST00000515063 TDRD6O60522 2096 aaKnown RBP3.28□□□□□ -1.89
CAST-242ENST00000515063 CPAMD8Q8IZJ3 1885 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 LOC100509620A0A075B734 347 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 IGKV3D-11A0A0A0MRZ8 115 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 IGHV1OR15-9A0A0B4J2B8 117 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 SMIM30A4D0T7 59 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 LINC00862A6NCI5 91 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 SHISA7A6NL88 538 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 OR4C45A6NMZ5 311 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 A8MU76 341 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 C17orf105B2RV13 164 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 ZNF587BE7ETH6 402 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 LMO7DNF2Z398 122 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 GPR171O14626 319 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 PIN1P1O15428 100 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 FABP7O15540 132 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 XRCC3O43542 346 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 HCRTR1O43613 425 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 LANCL1O43813 399 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 OR2T1O43869 369 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 DOK2O60496 412 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 TSPAN2O60636 221 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 ZNF254O75437 659 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 UPK3AO75631 287 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 UTS2O95399 124 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 BGLAPP02818 100 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 IGKV3-11P04433 115 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 GYPBP06028 91 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 MELTFP08582 738 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 CLUP10909 449 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 HPGDP15428 266 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 ALOX5APP20292 161 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 CXCR1P25024 350 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 CD1CP29017 333 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 RCVRNP35243 200 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 AQP2P41181 271 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 P2RX1P51575 399 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 FUT6P51993 359 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 OR10A3P58181 314 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 HNRNPKP61978 463 aaKnown RBP eCLIP3.27□□□□□ -1.89
CAST-242ENST00000515063 ERVK-25P63136 954 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 DHODHQ02127 395 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 RELQ04864 619 aaPredicted RBP3.27□□□□□ -1.89
CAST-242ENST00000515063 SKP2Q13309 424 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 RBM39Q14498 530 aaKnown RBP3.27□□□□□ -1.89
CAST-242ENST00000515063 INSL4Q14641 139 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 FCN2Q15485 313 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 TOMM34Q15785 309 aaPredicted RBP3.27□□□□□ -1.89
CAST-242ENST00000515063 SGCBQ16585 318 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 CLPPQ16740 277 aaPredicted RBP3.27□□□□□ -1.89
CAST-242ENST00000515063 GSG1Q2KHT4 349 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 C14orf28Q4W4Y0 310 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 Q5BKY6 102 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 TEX30Q5JUR7 227 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 C1QTNF12Q5T7M4 302 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 FAM27D1Q5T7N8 215 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 LIPNQ5VXI9 398 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 LAMTOR1Q6IAA8 161 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 PWWP2BQ6NUJ5 590 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 LEG1Q6P5S2 330 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 STAC2Q6ZMT1 411 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 ZNF704Q6ZNC4 412 aaPredicted RBP3.27□□□□□ -1.89
CAST-242ENST00000515063 ASB18Q6ZVZ8 466 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 SIAH3Q8IW03 269 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 CDH26Q8IXH8 852 aa3.27□□□□□ -1.89
CAST-242ENST00000515063 DND1Q8IYX4 353 aaKnown RBP3.27□□□□□ -1.89
CAST-242ENST00000515063 Q8N9G6 341 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms