RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 KAAG1Q9UBP8 84 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 SAMD4AQ9UPU9 718 aaKnown RBP9.09□□□□□ -0.95
RNF4-218ENST00000513284 SIGLEC7Q9Y286 467 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 U3KQK5 164 aa9.09□□□□□ -0.95
RNF4-218ENST00000513284 STAB2Q8WWQ8 2551 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 IGHV3OR15-7A0A075B7D8 119 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 OOEPA6NGQ2 149 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 SOCS2O14508 198 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 FFAR1O14842 300 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 AMY2BP19961 511 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 HOXD3P31249 432 aaPredicted RBP9.08□□□□□ -0.96
RNF4-218ENST00000513284 IFNGR2P38484 337 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 SLC7A2P52569 658 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 ECH1Q13011 328 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 OR8B8Q15620 311 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 KCNMB1Q16558 191 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 NKAPLQ5M9Q1 402 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 CASC10Q5T4H9 136 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 Q6ZS46 218 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 ZNF826PQ6ZT77 177 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 NAA40Q86UY6 237 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 Q8N2B8 174 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 GCSAMQ8N6F7 178 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 OR2AJ1Q8NGZ0 328 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 SLC7A13Q8TCU3 470 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 ST8SIA4Q92187 359 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 RSRC1Q96IZ7 334 aaKnown RBP9.08□□□□□ -0.96
RNF4-218ENST00000513284 WNT10AQ9GZT5 417 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 NUAK2Q9H093 628 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 MEGF9Q9H1U4 602 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 TRIM36Q9NQ86 728 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 GMPR2Q9P2T1 348 aaKnown RBP9.08□□□□□ -0.96
RNF4-218ENST00000513284 ONECUT1Q9UBC0 465 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 IER3IP1Q9Y5U9 82 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 SNX13Q9Y5W8 968 aa9.08□□□□□ -0.96
RNF4-218ENST00000513284 TRAV38-1A0A0B4J264 116 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 UNC119BA6NIH7 251 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 IMPA2O14732 288 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 RER1O15258 196 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 TXNDC12O95881 172 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 COX4I1P13073 169 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 EEF1B2P24534 225 aaKnown RBP9.07□□□□□ -0.96
RNF4-218ENST00000513284 NOS3P29474 1203 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 SLC6A6P31641 620 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 GSK3BP49841 420 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 UBE2E1P51965 193 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 GUCA2AQ02747 115 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 MZT1Q08AG7 82 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 GK2Q14410 553 aaPredicted RBP9.07□□□□□ -0.96
RNF4-218ENST00000513284 C8orf82Q6P1X6 216 aaPredicted RBP9.07□□□□□ -0.96
RNF4-218ENST00000513284 TBPL2Q6SJ96 375 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 SMARCD3Q6STE5 483 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 HACD2Q6Y1H2 254 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 CLPTM1LQ96KA5 538 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 CCL13Q99616 98 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 PCDHGB5Q9Y5G0 923 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 HYDINQ4G0P3 5121 aa9.07□□□□□ -0.96
RNF4-218ENST00000513284 NME4O00746 187 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 ATP8B1O43520 1251 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 PTP4A3O75365 173 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 PAHP00439 452 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 HLA-DQA2P01906 255 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 CA6P23280 308 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 OMPP47874 163 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 NUDT2P50583 147 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 TPTEP56180 551 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 HIST1H3AP68431 136 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 CD83Q01151 205 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 KRTAP27-1Q3LI81 207 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 HIST2H3PS2Q5TEC6 136 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 TEX36Q5VZQ5 186 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 HIST2H3AQ71DI3 136 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 MRPL21Q7Z2W9 205 aaKnown RBP9.06□□□□□ -0.96
RNF4-218ENST00000513284 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.06□□□□□ -0.96
RNF4-218ENST00000513284 C11orf53Q8IXP5 236 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 OR4C15Q8NGM1 316 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 FANK1Q8TC84 345 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 SPRYD4Q8WW59 207 aaPredicted RBP9.06□□□□□ -0.96
RNF4-218ENST00000513284 MCUR1Q96AQ8 359 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 CMTM5Q96DZ9 223 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 SEH1LQ96EE3 360 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 DMRTB1Q96MA1 342 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 ERMAPQ96PL5 475 aaPredicted RBP9.06□□□□□ -0.96
RNF4-218ENST00000513284 DDOQ99489 341 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 PITX2Q99697 317 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 ATF6BQ99941 703 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 FN3KRPQ9HA64 309 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 INPP5EQ9NRR6 644 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 ADA2Q9NZK5 511 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 KCNG2Q9UJ96 466 aa9.06□□□□□ -0.96
RNF4-218ENST00000513284 A0A1W2PRX2 142 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 F5H5K5 113 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.05□□□□□ -0.96
RNF4-218ENST00000513284 ARPC3O15145 178 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 LCATP04180 440 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 NHLRC4P0CG21 123 aaPredicted RBP9.05□□□□□ -0.96
RNF4-218ENST00000513284 ZNF823P16415 610 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 ANOS1P23352 680 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 TGM4P49221 684 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 ACSM1Q08AH1 577 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms