RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 A0A1W2PN81 502 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 A0A1W2PQF6 199 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 TMEM129A0AVI4 362 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 OR2M5A3KFT3 312 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 RAB27BO00194 218 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 FCMRO60667 390 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 CTSVO60911 334 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ETHE1O95571 254 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 SHC1P29353 583 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 CHRNA7P36544 502 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 HNRNPFP52597 415 aaKnown RBP3.8□□□□□ -1.8
VCAN-209ENST00000513016 ERVFRD-1P60508 538 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 B4GALNT1Q00973 533 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ZNF117Q03924 483 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ZIC1Q15915 447 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 CCBE1Q6UXH8 406 aaPredicted RBP3.8□□□□□ -1.8
VCAN-209ENST00000513016 NUP37Q8NFH4 326 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 OR6X1Q8NH79 312 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 SAP25Q8TEE9 199 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 RBMX2Q9Y388 322 aaKnown RBP3.8□□□□□ -1.8
VCAN-209ENST00000513016 ST8SIA3O43173 380 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ANGPTL7O43827 346 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 PMS2P2O95744 297 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 EML2O95834 649 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 SNRPBP14678 240 aaKnown RBP3.8□□□□□ -1.8
VCAN-209ENST00000513016 USF2Q15853 346 aaPredicted RBP3.8□□□□□ -1.8
VCAN-209ENST00000513016 ACOT6Q3I5F7 207 aaPredicted RBP3.8□□□□□ -1.8
VCAN-209ENST00000513016 SPATA46Q5T0L3 261 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ZNF767PQ75MW2 155 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 OR2T35Q8NGX2 323 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 OR6S1Q8NH40 331 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 LGALS14Q8TCE9 139 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ARHGDIGQ99819 225 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 CNTNAP3Q9BZ76 1288 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 GHITMQ9H3K2 345 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 CLN8Q9UBY8 286 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ST3GAL6Q9Y274 331 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 LIPGQ9Y5X9 500 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 TJP1Q07157 1748 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 COL18A1P39060 1754 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 LRP5O75197 1615 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 TMEM210A6NLX4 147 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 M0R1X1 148 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 NDUFA2O43678 99 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 SSX4O60224 188 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 PMP2P02689 132 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 CELA2BP08218 269 aaPredicted RBP3.8□□□□□ -1.8
VCAN-209ENST00000513016 ZNF32P17041 273 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ZBTB25P24278 435 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 METAP1P53582 386 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 PHLDA2Q53GA4 152 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ZNF529Q6P280 563 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 TMPRSS11FQ6ZWK6 438 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 AAMDCQ9H7C9 122 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 A0A1B0GV50 99 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 KRBA1A5PL33 1030 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 DVL1O14640 695 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 MOSPD3O75425 235 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 CAPNS1P04632 268 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 S100A8P05109 93 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 IGHV4-34P06331 123 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 RRASP10301 218 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 GNB3P16520 340 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ELK1P19419 428 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 HTR2BP41595 481 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 DVL1P1P54792 670 aaPredicted RBP3.8□□□□□ -1.8
VCAN-209ENST00000513016 RAB5BP61020 215 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 IAH1Q2TAA2 248 aaPredicted RBP3.8□□□□□ -1.8
VCAN-209ENST00000513016 RNF165Q6ZSG1 346 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ANKRD13BQ86YJ7 626 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 PLPP7Q8NBV4 271 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 DYNC2LI1Q8TCX1 351 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 PINX1Q96BK5 328 aaKnown RBP3.8□□□□□ -1.8
VCAN-209ENST00000513016 TMEM147Q9BVK8 224 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ELOVL5Q9NYP7 299 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 SERPINE3A8MV23 424 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 NKX2-8O15522 239 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 COX7A2P2O60397 106 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 TOXO94900 526 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 CST2P09228 141 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 CD1EP15812 388 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 PSMB1P20618 241 aaKnown RBP3.8□□□□□ -1.8
VCAN-209ENST00000513016 PXDC1Q5TGL8 231 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 FBXW9Q5XUX1 488 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 OR52L2PQ8NGH6 319 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 TERB2Q8NHR7 220 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 SMIM3Q9BZL3 60 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 TAS2R5Q9NYW4 299 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 DOCK1Q14185 1865 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ALPLP05186 524 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 FGF2P09038 288 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 LIFP15018 202 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ACP1P24666 158 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 LSM6P62312 80 aaKnown RBP3.8□□□□□ -1.8
VCAN-209ENST00000513016 PRDX4Q13162 271 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 ZNF674Q2M3X9 581 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 FAHD1Q6P587 224 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 UNQ9370/PRO34162Q6UXP9 181 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 TMEM104Q8NE00 496 aa3.8□□□□□ -1.8
VCAN-209ENST00000513016 C17orf47Q8NEP4 570 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms