RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 IGHV2-5P01817 119 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 MSMBP08118 114 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 GNALP38405 381 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 ROM1Q03395 351 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 MZT1Q08AG7 82 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 ZSCAN26Q16670 478 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 ZNF829Q3KNS6 432 aaPredicted RBP13.4□□□□□ -0.26
DDX41-214ENST00000512334 IL17RELQ6ZVW7 336 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 C1orf87Q8N0U7 546 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 SPICQ8N5J4 248 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 CELF2-AS1Q8N7Q2 184 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 OR10H4Q8NGA5 316 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 OR11L1Q8NGX0 322 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 OR8S1Q8NH09 359 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 OR51F2Q8NH61 342 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 APOL4Q9BPW4 351 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 PAPOLGQ9BWT3 736 aaKnown RBP13.4□□□□□ -0.26
DDX41-214ENST00000512334 FAM206AQ9NX38 181 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 LPAR3Q9UBY5 353 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 HNF1AP20823 631 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 PMELP40967 661 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 GATA4P43694 442 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 DVL1P1P54792 670 aaPredicted RBP13.39□□□□□ -0.27
DDX41-214ENST00000512334 EGR3Q06889 387 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 TMED1Q13445 227 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 ZMYND11Q15326 602 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 MPPED2Q15777 294 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 SNCBQ16143 134 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 CR1LQ2VPA4 569 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 FAM120AOSQ5T036 256 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 PLEKHG7Q6ZR37 379 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 KLBQ86Z14 1044 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 FTMTQ8N4E7 242 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 KLHL36Q8N4N3 616 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 SPERTQ8NA61 448 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 CSNK2A3Q8NEV1 391 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 ERGIC1Q969X5 290 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 TMEM186Q96B77 213 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 LYZL4Q96KX0 146 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 PBOV1Q9GZY1 135 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 FN3KRPQ9HA64 309 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 HIF1ANQ9NWT6 349 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 ZNF391Q9UJN7 358 aa13.39□□□□□ -0.27
DDX41-214ENST00000512334 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDX41-214ENST00000512334 A0A1W2PQL4 384 aaPredicted RBP13.38□□□□□ -0.27
DDX41-214ENST00000512334 ACOD1A6NK06 481 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 A6NLC8 198 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 FAM20BO75063 409 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 ENTPD6O75354 484 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 KRT8P05787 483 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 GRPP07492 148 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 OR2T7P0C7T2 308 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 PCMT1P22061 227 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 DCTDP32321 178 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 MDH2P40926 338 aaKnown RBP13.38□□□□□ -0.27
DDX41-214ENST00000512334 MFGE8Q08431 387 aaPredicted RBP13.38□□□□□ -0.27
DDX41-214ENST00000512334 OR8B8Q15620 311 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 ZNF181Q2M3W8 571 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 TMEM155Q4W5P6 130 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 MEDAGQ5VYS4 303 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 SSX6Q7RTT6 188 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 LRRC28Q86X40 367 aaPredicted RBP13.38□□□□□ -0.27
DDX41-214ENST00000512334 MUC20Q8N307 709 aaPredicted RBP13.38□□□□□ -0.27
DDX41-214ENST00000512334 OR2T27Q8NH04 317 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 C14orf119Q9NWQ9 140 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 RHBDD3Q9Y3P4 386 aa13.38□□□□□ -0.27
DDX41-214ENST00000512334 PPIAL4EA0A075B759 164 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 TRAV20A0A0B4J274 112 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 hCG_1807616A0A1W2PRN6 198 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 ANXA2P2A6NMY6 339 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 PPIAL4DF5H284 164 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 LOC110117498-PIK3R3F6TDL0 507 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 RPP14O95059 124 aaKnown RBP13.37□□□□□ -0.27
DDX41-214ENST00000512334 PPIAL4FP0DN26 164 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 ACKR3P25106 362 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 MTNR1AP48039 350 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 SNRPGP62308 76 aaKnown RBP13.37□□□□□ -0.27
DDX41-214ENST00000512334 RCN1Q15293 331 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 LRRC36Q1X8D7 754 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 FAM201AQ5SY85 155 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 BCL2L15Q5TBC7 163 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 GALNT4Q8N4A0 578 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 YIPF7Q8N8F6 280 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 BOLLQ8N9W6 283 aaKnown RBP13.37□□□□□ -0.27
DDX41-214ENST00000512334 OR51E1Q8TCB6 317 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 Q8TCH9 128 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 FAM71F1Q96KD3 344 aaPredicted RBP13.37□□□□□ -0.27
DDX41-214ENST00000512334 AASSQ9UDR5 926 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 MRM2Q9UI43 246 aaKnown RBP13.37□□□□□ -0.27
DDX41-214ENST00000512334 PPIAL4AQ9Y536 164 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 R4GMQ9 66 aa13.37□□□□□ -0.27
DDX41-214ENST00000512334 A0A0U1RQV5 110 aa13.36□□□□□ -0.27
DDX41-214ENST00000512334 LOC100130705A0A1B0GUX0 176 aa13.36□□□□□ -0.27
DDX41-214ENST00000512334 SNTNA6NMZ2 147 aa13.36□□□□□ -0.27
DDX41-214ENST00000512334 ZNF850A8MQ14 1090 aa13.36□□□□□ -0.27
DDX41-214ENST00000512334 E9PQ18 207 aa13.36□□□□□ -0.27
DDX41-214ENST00000512334 PLPP2O43688 288 aa13.36□□□□□ -0.27
DDX41-214ENST00000512334 PNPP00491 289 aa13.36□□□□□ -0.27
DDX41-214ENST00000512334 SRD5A1P18405 259 aa13.36□□□□□ -0.27
DDX41-214ENST00000512334 LCN2P80188 198 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms