RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 CENPOQ9BU64 300 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 CHID1Q9BWS9 393 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 OR2J1Q9GZK6 312 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 SYT4Q9H2B2 425 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 LRMDAQ9H2I8 198 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 OR52D1Q9H346 318 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 NARFLQ9H6Q4 476 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 ZNF442Q9H7R0 627 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 MED20Q9H944 212 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 MOV10Q9HCE1 1003 aaKnown RBP3.85□□□□□ -1.79
NUP54-206ENST00000508465 HINT3Q9NQE9 182 aaKnown RBP3.85□□□□□ -1.79
NUP54-206ENST00000508465 NDE1Q9NXR1 346 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 EIF3KQ9UBQ5 218 aaKnown RBP3.85□□□□□ -1.79
NUP54-206ENST00000508465 B9D1Q9UPM9 204 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 STARD10Q9Y365 291 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 GRIP1Q9Y3R0 1128 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 LYVE1Q9Y5Y7 322 aa3.85□□□□□ -1.79
NUP54-206ENST00000508465 ABCA2Q9BZC7 2435 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 ANK3Q12955 4377 aaKnown RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 A0A096LNT2 108 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 IGLV1-36A0A0B4J1U3 117 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 IGHV3-64DA0A0J9YX35 117 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 LOC390937A0A1W2PQ73 354 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 TVP23AA6NH52 213 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 IFITM10A6NMD0 228 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 M0R233 179 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 RAB27BO00194 218 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 RER1O15258 196 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 SGCEO43556 437 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 SPRY3O43610 288 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 AHCYL1O43865 530 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 ENTPD5O75356 428 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 KRT36O76013 467 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 CCNB2O95067 398 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 SOX14O95416 240 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 STAMBPO95630 424 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 TXNDC12O95881 172 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 RENP00797 406 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 PTHP01270 115 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 IGKV3-20P01619 116 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 HLA-DQA2P01906 255 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 TFP02787 698 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 GYPBP06028 91 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 IGHV4-31P0DP07 118 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 ZNF250P15622 560 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 POU1F1P28069 291 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 SLC6A6P31641 620 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 IL2RGP31785 369 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 IFNGR2P38484 337 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 RPS27P42677 84 aaKnown RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 RAD52P43351 418 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 HTR5AP47898 357 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 EVX1P49640 407 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 PPOXP50336 477 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 RPS6KA3P51812 740 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 KLF3P57682 345 aaPredicted RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 SELENOVP59797 346 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 PCBD1P61457 104 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 PPP1CBP62140 327 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 PPP2R2BQ00005 443 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.84□□□□□ -1.792e-6■□□□□ 10.7
NUP54-206ENST00000508465 TSPAN31Q12999 210 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 PSG7Q13046 419 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 TRIP10Q15642 601 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 MICAQ29983 383 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 RSPO1Q2MKA7 263 aaPredicted RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 TMEM249Q2WGJ8 235 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 ZNF718Q3SXZ3 478 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 ANKDD1AQ495B1 522 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 FAM98BQ52LJ0 330 aaKnown RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 CCDC92Q53HC0 331 aaPredicted RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 SPRNQ5BIV9 151 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 ELFN2Q5R3F8 820 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 FAM205BPQ63HN1 556 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 CYB5R2Q6BCY4 276 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 OR2T5Q6IEZ7 315 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 LCN8Q6JVE9 175 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 IL17RELQ6ZVW7 336 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 RFPL4BQ6ZWI9 263 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 DPPA2Q7Z7J5 298 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 LINC00346Q8IVM7 164 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 HS3ST5Q8IZT8 346 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 OR8H2Q8N162 312 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 IQCF1Q8N6M8 205 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 NPEPL1Q8NDH3 523 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 SDR9C7Q8NEX9 313 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 OR9Q1Q8NGQ5 310 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 OR2T29Q8NH02 315 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 OR4Q3Q8NH05 313 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 SLC25A40Q8TBP6 338 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 KLF14Q8TD94 323 aaPredicted RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 CANT1Q8WVQ1 401 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 YIPF5Q969M3 257 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 SPSB4Q96A44 273 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 SLCO4A1Q96BD0 722 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 OTULINQ96BN8 352 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 CMBLQ96DG6 245 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 C4orf45Q96LM5 186 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 FEVQ99581 238 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 NUDT16L1Q9BRJ7 211 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms