RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 CCNJQ5T5M9 372 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 FHL5Q5TD97 284 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 AGBL2Q5U5Z8 902 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 OTPQ5XKR4 325 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 SPINK14Q6IE38 97 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR52W1Q6IF63 320 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF544Q6NX49 715 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 C6orf89Q6UWU4 347 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 H2AFVQ71UI9 128 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 HDDC2Q7Z4H3 204 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 TGIF2LYQ8IUE0 185 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 LINC00612Q8N6U2 182 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 C12orf29Q8N999 325 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 CCDC54Q8NEL0 328 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR4F15Q8NGB8 312 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR10R2Q8NGX6 335 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 DTX3LQ8TDB6 740 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 MCOLN3Q8TDD5 553 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 GEMIN6Q8WXD5 167 aaKnown RBP2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 DNAJC1Q96KC8 554 aaKnown RBP2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 SERPINB12Q96P63 405 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 P2RX4Q99571 388 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 BBS2Q9BXC9 721 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZYG11BQ9C0D3 744 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 ACTR3CQ9C0K3 210 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 NEUROG2Q9H2A3 272 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 CLMPQ9H6B4 373 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 DMAP1Q9NPF5 467 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 CCL28Q9NRJ3 127 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 MTCH1Q9NZJ7 389 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 DEC1Q9P2X7 70 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 SAR1BQ9Y6B6 198 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 LAMA1P25391 3075 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 NUP210Q8TEM1 1887 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 DMXL2Q8TDJ6 3036 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 BPTFQ12830 3046 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 A0A1W2PRD5 423 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 TMEM120BA0PK00 339 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF233A6NK53 670 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 GJE1A6NN92 205 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 BOLA2-SMG1P6H3BVE0 249 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 XKRYO14609 159 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 SLC9A3R1O14745 358 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 EMC8O43402 210 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 AIREO43918 545 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 CLDN11O75508 207 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 TNFSF13O75888 250 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 OTCP00480 354 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 IGKV3-15P01624 115 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 HLA-HP01893 362 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZDHHC11BP0C7U3 371 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 FOLR1P15328 257 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 MGMTP16455 207 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 GCLMP48507 274 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 BCAP31P51572 246 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 CAV2P51636 162 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 CRISP1P54107 249 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 CLDN18P56856 261 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 DAOAP59103 153 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 LYZP61626 148 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 NUTF2P61970 127 aaKnown RBP2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 RPS21P63220 83 aaKnown RBP2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 PRPSAP1Q14558 356 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 HERPUD1Q15011 391 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 NCF4Q15080 339 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 RFX4Q33E94 735 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZBED5Q49AG3 693 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 TMEM215Q68D42 235 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 FRMPD2BQ6IN97 320 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 CLEC20AQ6ZU45 233 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 C8orf31Q8N9H6 132 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 C20orf203Q8NBC4 194 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 LINC00301Q8NCQ3 95 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 WFDC5Q8TCV5 224 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 DUS3LQ96G46 650 aaKnown RBP2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 SMARCD1Q96GM5 515 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 OPALINQ96PE5 141 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR5B12Q96R08 314 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 GABRG3Q99928 467 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 YTHDF1Q9BYJ9 559 aaKnown RBP2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 UCK2Q9BZX2 261 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 IL22Q9GZX6 179 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 RPF2Q9H7B2 306 aaKnown RBP2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 CYP3A43Q9HB55 503 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 NTN4Q9HB63 628 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 EML4Q9HC35 981 aaKnown RBP2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 RETNQ9HD89 108 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 ASH1LQ9NR48 2969 aaKnown RBP2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 NBEAQ8NFP9 2946 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 SCN1AP35498 2009 aa2.28□□□□□ -2.04
TRAPPC11-205ENST00000506426 PCDH15Q96QU1 1955 aa2.27□□□□□ -2.05
TRAPPC11-205ENST00000506426 MTCL1Q9Y4B5 1905 aaKnown RBP2.27□□□□□ -2.05
TRAPPC11-205ENST00000506426 PDCD11Q14690 1871 aaKnown RBP2.27□□□□□ -2.05
TRAPPC11-205ENST00000506426 FAM92AA1XBS5 289 aa2.27□□□□□ -2.05
TRAPPC11-205ENST00000506426 ZNF701M0R085 212 aaPredicted RBP2.27□□□□□ -2.05
TRAPPC11-205ENST00000506426 PEX7O00628 323 aa2.27□□□□□ -2.05
TRAPPC11-205ENST00000506426 SCAMP2O15127 329 aaKnown RBP2.27□□□□□ -2.05
TRAPPC11-205ENST00000506426 KLRC4O43908 158 aa2.27□□□□□ -2.05
TRAPPC11-205ENST00000506426 DPM1O60762 260 aa2.27□□□□□ -2.05
TRAPPC11-205ENST00000506426 NPIPB7O75200 414 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms