RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 ZSCAN4Q8NAM6 433 aaPredicted RBP4.81□□□□□ -1.64
GYPB-205ENST00000505583 SDR9C7Q8NEX9 313 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 OR51L1Q8NGJ5 315 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 FAM110DQ8TAY7 271 aaPredicted RBP4.81□□□□□ -1.64
GYPB-205ENST00000505583 FANK1Q8TC84 345 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 ERGIC1Q969X5 290 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 FAM162AQ96A26 154 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 ZNF799Q96GE5 643 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 DDOQ99489 341 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 CCL13Q99616 98 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 ADAT1Q9BUB4 502 aaKnown RBP4.81□□□□□ -1.64
GYPB-205ENST00000505583 TRIM15Q9C019 465 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 OR52D1Q9H346 318 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 FN3KRPQ9HA64 309 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 ERVK-18Q9QC07 812 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 DNAJB11Q9UBS4 358 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 RPUSD1Q9UJJ7 312 aaKnown RBP4.81□□□□□ -1.64
GYPB-205ENST00000505583 V9GYQ6 96 aa4.81□□□□□ -1.64
GYPB-205ENST00000505583 TRAV38-1A0A0B4J264 116 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 ZNF816-ZNF321PA0A0X1KG74 233 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 hCG_1807616A0A1W2PRN6 198 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 GGT3PA6NGU5 568 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 A6NLC8 198 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 G3V4G9 280 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 RNASEK-C17orf49H0YIS7 233 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 ACOT8O14734 319 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 TIMM23O14925 209 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 PLXNB1O43157 2135 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 GMDSO60547 372 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 RENP00797 406 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 HLA-DQA2P01906 255 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 SEMG1P04279 462 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 LIPFP07098 398 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 TROVE2P10155 538 aaKnown RBP eCLIP4.8□□□□□ -1.64
GYPB-205ENST00000505583 PAX6P26367 422 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 SLC6A6P31641 620 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 OTX1P32242 354 aaPredicted RBP4.8□□□□□ -1.64
GYPB-205ENST00000505583 MSX2P35548 267 aaPredicted RBP4.8□□□□□ -1.64
GYPB-205ENST00000505583 NUDT2P50583 147 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 PRKXP51817 358 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 TPTEP56180 551 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 CSNK2BP67870 215 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 EGR3Q06889 387 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 ECH1Q13011 328 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 MALLQ13021 153 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 KLRD1Q13241 179 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 PCK2Q16822 640 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 CDONQ4KMG0 1287 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 WDR38Q5JTN6 314 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 TEX36Q5VZQ5 186 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 GLYATQ6IB77 296 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 SLC35E4Q6ICL7 350 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 PGM2L1Q6PCE3 622 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 DNM1P34Q6PK57 102 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 ARPINQ7Z6K5 226 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 CYP4Z1Q86W10 505 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 THNSL2Q86YJ6 484 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 MRPL41Q8IXM3 137 aaKnown RBP4.8□□□□□ -1.64
GYPB-205ENST00000505583 RNF148Q8N7C7 305 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 Q8N7P7 452 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 PNLDC1Q8NA58 520 aaKnown RBP4.8□□□□□ -1.64
GYPB-205ENST00000505583 CYB561A3Q8NBI2 242 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 SCCPDHQ8NBX0 429 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 LY6G5BQ8NDX9 201 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 OR56B2PQ8NGI1 322 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 OR2AJ1Q8NGZ0 328 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 RP9Q8TA86 221 aaKnown RBP4.8□□□□□ -1.64
GYPB-205ENST00000505583 TBC1D15Q8TC07 691 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 LRRC29Q8WV35 223 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 C17orf50Q8WW18 174 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 ST8SIA4Q92187 359 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 UBE2FQ969M7 185 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 KCTD14Q9BQ13 255 aaPredicted RBP4.8□□□□□ -1.64
GYPB-205ENST00000505583 IFT27Q9BW83 186 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 NDEL1Q9GZM8 345 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 EGLN3Q9H6Z9 239 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 CNTD2Q9H8S5 307 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 TCF7L1Q9HCS4 588 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 SIRT7Q9NRC8 400 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 DCAF13Q9NV06 445 aaKnown RBP4.8□□□□□ -1.64
GYPB-205ENST00000505583 ZNF319Q9P2F9 582 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 ABCD2Q9UBJ2 740 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 AURKCQ9UQB9 309 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 SIGLEC9Q9Y336 463 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 N6AMT1Q9Y5N5 214 aa4.8□□□□□ -1.64
GYPB-205ENST00000505583 BHLHE40O14503 412 aa4.79□□□□□ -1.64
GYPB-205ENST00000505583 SLC22A2O15244 555 aa4.79□□□□□ -1.64
GYPB-205ENST00000505583 TSPAN9O75954 239 aa4.79□□□□□ -1.64
GYPB-205ENST00000505583 GADD45GO95257 159 aa4.79□□□□□ -1.64
GYPB-205ENST00000505583 GYPBP06028 91 aa4.79□□□□□ -1.64
GYPB-205ENST00000505583 CLUP10909 449 aa4.79□□□□□ -1.64
GYPB-205ENST00000505583 H2AFXP16104 143 aaPredicted RBP4.79□□□□□ -1.64
GYPB-205ENST00000505583 GSSP48637 474 aa4.79□□□□□ -1.64
GYPB-205ENST00000505583 GMFBP60983 142 aa4.79□□□□□ -1.64
GYPB-205ENST00000505583 PSME3P61289 254 aa4.79□□□□□ -1.64
GYPB-205ENST00000505583 RPL15P61313 204 aaKnown RBP4.79□□□□□ -1.64
GYPB-205ENST00000505583 FAM3AP98173 230 aa4.79□□□□□ -1.64
GYPB-205ENST00000505583 SPIBQ01892 262 aa4.79□□□□□ -1.64
GYPB-205ENST00000505583 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.79□□□□□ -1.645e-6■□□□□ 10.7
GYPB-205ENST00000505583 IKZF1Q13422 519 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms