RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ECSITQ9BQ95 431 aa4.87□□□□□ -1.63
GYPB-204ENST00000504951 MCRIP2Q9BUT9 160 aaKnown RBP4.87□□□□□ -1.63
GYPB-204ENST00000504951 TMEM120AQ9BXJ8 343 aa4.87□□□□□ -1.63
GYPB-204ENST00000504951 DNTTIP1Q9H147 329 aa4.87□□□□□ -1.63
GYPB-204ENST00000504951 SYT4Q9H2B2 425 aa4.87□□□□□ -1.63
GYPB-204ENST00000504951 TOR3AQ9H497 397 aa4.87□□□□□ -1.63
GYPB-204ENST00000504951 RERGLQ9H628 205 aa4.87□□□□□ -1.63
GYPB-204ENST00000504951 ZNF702PQ9H963 129 aa4.87□□□□□ -1.63
GYPB-204ENST00000504951 SMURF1Q9HCE7 757 aa4.87□□□□□ -1.63
GYPB-204ENST00000504951 INTS9Q9NV88 658 aaKnown RBP4.87□□□□□ -1.63
GYPB-204ENST00000504951 TMCC3Q9ULS5 477 aa4.87□□□□□ -1.63
GYPB-204ENST00000504951 PRPF19Q9UMS4 504 aaKnown RBP4.87□□□□□ -1.63
GYPB-204ENST00000504951 COA3Q9Y2R0 106 aaPredicted RBP4.87□□□□□ -1.63
GYPB-204ENST00000504951 SF3B6Q9Y3B4 125 aaKnown RBP4.87□□□□□ -1.63
GYPB-204ENST00000504951 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.86□□□□□ -1.63
GYPB-204ENST00000504951 MEIOCA2RUB1 952 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 FAM220BPB1ANY3 271 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 H3BUX3 64 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 SOCS2O14508 198 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 DVL1O14640 695 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 OR10H3O60404 316 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 GMDSO60547 372 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 SLC16A7O60669 478 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 PTP4A3O75365 173 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 ALDOBP05062 364 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 VSIG10L2P0DP72 767 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 FPR3P25089 353 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 CHATP28329 748 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 SLC6A1P30531 599 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 RPL4P36578 427 aaKnown RBP4.86□□□□□ -1.63
GYPB-204ENST00000504951 CDKN2AP42771 156 aaKnown RBP4.86□□□□□ -1.63
GYPB-204ENST00000504951 TGM4P49221 684 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 DYNLT3P51808 116 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 HIST1H3AP68431 136 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 AQP6Q13520 282 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 KRR1Q13601 381 aaKnown RBP4.86□□□□□ -1.63
GYPB-204ENST00000504951 TRAM2Q15035 370 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 MPPED2Q15777 294 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 KRTAP27-1Q3LI81 207 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 ZBED5Q49AG3 693 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 HIST2H3PS2Q5TEC6 136 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 PRAMEF6Q5VXH4 476 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 METTL21CQ5VZV1 264 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 CGB2Q6NT52 195 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 ERICH5Q6P6B1 374 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 TMPRSS11FQ6ZWK6 438 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 MBOAT2Q6ZWT7 520 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 HIST2H3AQ71DI3 136 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.86□□□□□ -1.63
GYPB-204ENST00000504951 GLB1L2Q8IW92 636 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 SDR9C7Q8NEX9 313 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 OR2T12Q8NG77 320 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 ACOT11Q8WXI4 607 aaPredicted RBP4.86□□□□□ -1.63
GYPB-204ENST00000504951 DPF1Q92782 380 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 ZNF570Q96NI8 536 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 DDOQ99489 341 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 DCTN5Q9BTE1 182 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 FNDC11Q9BVV2 318 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 NUAK2Q9H093 628 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 METTL8Q9H825 291 aaKnown RBP4.86□□□□□ -1.63
GYPB-204ENST00000504951 NMNAT1Q9HAN9 279 aaPredicted RBP4.86□□□□□ -1.63
GYPB-204ENST00000504951 RNPEPL1Q9HAU8 725 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 SAR1AQ9NR31 198 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 INPP5EQ9NRR6 644 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 UFSP2Q9NUQ7 469 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 CMTM6Q9NX76 183 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 GRHPRQ9UBQ7 328 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 SIGLEC7Q9Y286 467 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 LHFPL6Q9Y693 200 aa4.86□□□□□ -1.63
GYPB-204ENST00000504951 IGLV1-36A0A0B4J1U3 117 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 ELOVL7A1L3X0 281 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 NKX6-3A6NJ46 265 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 FAM90A8PA6NJQ4 464 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 F2RL2O00254 374 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 KHDRBS3O75525 346 aaKnown RBP4.85□□□□□ -1.63
GYPB-204ENST00000504951 ZNF682O95780 498 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 CLIC3O95833 236 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 IFNA14P01570 189 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 IFNW1P05000 195 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 PSKH1P11801 424 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 OMPP47874 163 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 ELF3P78545 371 aaPredicted RBP4.85□□□□□ -1.63
GYPB-204ENST00000504951 PRB3Q04118 309 aaPredicted RBP4.85□□□□□ -1.63
GYPB-204ENST00000504951 MZT1Q08AG7 82 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 GK2Q14410 553 aaPredicted RBP4.85□□□□□ -1.63
GYPB-204ENST00000504951 SEC23BQ15437 767 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 KCNMB1Q16558 191 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 COQ5Q5HYK3 327 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 SFRP4Q6FHJ7 346 aaPredicted RBP4.85□□□□□ -1.63
GYPB-204ENST00000504951 HCP5Q6MZN7 132 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 ZNF730Q6ZMV8 503 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 CFAP77Q6ZQR2 320 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 SLC36A1Q7Z2H8 476 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 FAM90A1Q86YD7 464 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 SLC15A3Q8IY34 581 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 RNF113BQ8IZP6 322 aaKnown RBP4.85□□□□□ -1.63
GYPB-204ENST00000504951 FGFRL1Q8N441 504 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 GCSAMQ8N6F7 178 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 OR5D13Q8NGL4 314 aa4.85□□□□□ -1.63
GYPB-204ENST00000504951 COQ7Q99807 217 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms