RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 TAS2R20P59543 309 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 ACTBP60709 375 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 ACTG1P63261 375 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 GUCA2AQ02747 115 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 PLA2G7Q13093 441 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 RAB11BQ15907 218 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 LINC00696Q6ZRV3 163 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 FAM109AQ8N4B1 249 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 OR51D1Q8NGF3 324 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 GLMPQ8WWB7 406 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 GCDHQ92947 438 aaPredicted RBP10.23□□□□□ -0.77
USP46-204ENST00000503060 FAM206AQ9NX38 181 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 FOXJ2Q9P0K8 574 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 GDF2Q9UK05 429 aaPredicted RBP10.23□□□□□ -0.77
USP46-204ENST00000503060 POLR1DQ9Y2S0 133 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 GPR179Q6PRD1 2367 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 PCSK5Q92824 1860 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 P2RY10O00398 339 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 TLX3O43711 291 aaPredicted RBP10.23□□□□□ -0.77
USP46-204ENST00000503060 ITGA5P08648 1049 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 CDAP32320 146 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 RAB25P57735 213 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 MRPS10P82664 201 aaKnown RBP10.23□□□□□ -0.77
USP46-204ENST00000503060 KCNMB1Q16558 191 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 ACER2Q5QJU3 275 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 FAM166AQ6J272 317 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 CFAP77Q6ZQR2 320 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 COLCA1Q6ZS62 124 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 GPR137CQ8N3F9 429 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 OR2AJ1Q8NGZ0 328 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 C15orf40Q8WUR7 153 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 PIGQQ9BRB3 760 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 NAA11Q9BSU3 229 aaPredicted RBP10.23□□□□□ -0.77
USP46-204ENST00000503060 NUBP2Q9Y5Y2 271 aa10.23□□□□□ -0.77
USP46-204ENST00000503060 MED12Q93074 2177 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 CCDC187A0A096LP49 1063 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 A0A0J9YW62 118 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 GLSO94925 669 aaPredicted RBP10.22□□□□□ -0.77
USP46-204ENST00000503060 VAMP5O95183 116 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 MT-CO3P00414 261 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 SRD5A2P31213 254 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 B3GALT5-AS1P59052 145 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 CSNK2A1P68400 391 aaPredicted RBP10.22□□□□□ -0.77
USP46-204ENST00000503060 ZFP69Q49AA0 526 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 GLT8D1Q68CQ7 371 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 FCAMRQ8WWV6 532 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 FAM3DQ96BQ1 224 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 ZNF486Q96H40 463 aaPredicted RBP10.22□□□□□ -0.77
USP46-204ENST00000503060 LRFN3Q9BTN0 628 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 CACNG6Q9BXT2 260 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 RANGRFQ9HD47 186 aaPredicted RBP10.22□□□□□ -0.77
USP46-204ENST00000503060 IGHV3-15A0A0B4J1V0 119 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 MT-ND4P03905 459 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 TCRBP04435 133 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 ACSM4P0C7M7 580 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 CD37P11049 281 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 NR2C1P13056 603 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 EFNB2P52799 333 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 FLI1Q01543 452 aaPredicted RBP10.22□□□□□ -0.77
USP46-204ENST00000503060 SNTB2Q13425 540 aaKnown RBP10.22□□□□□ -0.77
USP46-204ENST00000503060 CREB3L2Q70SY1 520 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 SLC25A28Q96A46 364 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 FYTTD1Q96QD9 318 aaKnown RBP10.22□□□□□ -0.77
USP46-204ENST00000503060 BEX2Q9BXY8 128 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 GPR87Q9BY21 358 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 PBOV1Q9GZY1 135 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 METTL9Q9H1A3 318 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 GLTPQ9NZD2 209 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 COPZ2Q9P299 210 aa10.22□□□□□ -0.77
USP46-204ENST00000503060 VPS13AQ96RL7 3174 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 LOC100289279A0A1B0GTE1 492 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 MEGF11A6BM72 1044 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 GJE1A6NN92 205 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 ZNF878C9JN71 531 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 ACOT7O00154 380 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 XRCC3O43542 346 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 LMX1BO60663 402 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 TTRP02766 147 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 PTHLHP12272 177 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 CSNK1A1P48729 337 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 RRAS2P62070 204 aaPredicted RBP10.21□□□□□ -0.77
USP46-204ENST00000503060 IFITM2Q01629 132 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 ANKRD16Q6P6B7 361 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 YRDCQ86U90 279 aaKnown RBP10.21□□□□□ -0.77
USP46-204ENST00000503060 DMRTC2Q8IXT2 367 aaPredicted RBP10.21□□□□□ -0.77
USP46-204ENST00000503060 BEST3Q8N1M1 668 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 OR9K2Q8NGE7 335 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 OR51A2Q8NGJ7 313 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 PSMF1Q92530 271 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 TMEM54Q969K7 222 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 CPNE4Q96A23 557 aaPredicted RBP10.21□□□□□ -0.77
USP46-204ENST00000503060 OR2M2Q96R28 347 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 MRPL15Q9P015 296 aaKnown RBP10.21□□□□□ -0.77
USP46-204ENST00000503060 RCE1Q9Y256 329 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 STARD10Q9Y365 291 aa10.21□□□□□ -0.77
USP46-204ENST00000503060 NCOR1O75376 2440 aa10.21□□□□□ -0.78
USP46-204ENST00000503060 LRRC3CA6NJW4 275 aa10.21□□□□□ -0.78
USP46-204ENST00000503060 NPIPA2E9PIF3 369 aa10.21□□□□□ -0.78
USP46-204ENST00000503060 NPIPA3F8WFD2 350 aa10.21□□□□□ -0.78
USP46-204ENST00000503060 TNFSF11O14788 317 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms