RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	SLC22A11	Q9NSA0	550 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ALKBH4	Q9NXW9	302 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	EHF	Q9NZC4	300 aa		11.91	□□□□□ -0.5
SUPT20H-222	ENST00000495071	IGHV1OR15-9	A0A0B4J2B8	117 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071		A0A1W2PNR3	127 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TMEM14DP	A8MWL7	114 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	AGPAT2	O15120	278 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	RER1	O15258	196 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	GSTP1	P09211	210 aa	Known RBP	11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SLC6A9	P48067	706 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CSNK1E	P49674	416 aa	Known RBP	11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	GABRE	P78334	506 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	MYBPH	Q13203	477 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	PCK2	Q16822	640 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	LDLRAD3	Q86YD5	345 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	OR56B1	Q8NGI3	324 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	OR10Z1	Q8NGY1	313 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	RRNAD1	Q96FB5	475 aa	Known RBP	11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	NMES1	Q9C002	83 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZNF768	Q9H5H4	540 aa	Known RBP	11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ACKR4	Q9NPB9	350 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FLVCR1	Q9Y5Y0	555 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	NUP210L	Q5VU65	1888 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ASCC3	Q8N3C0	2202 aa	Known RBP	11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	IGHV1OR21-1	A0A087WYE8	117 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TRBV11-1	A0A0K0K1C0	115 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	LIPT2	A6NK58	231 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZNF726	A6NNF4	738 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	C2CD4D	B7Z1M9	353 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CDC14B	O60729	498 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	QRFP	P83859	136 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	LYPD6	Q86Y78	171 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ARRDC1	Q8N5I2	433 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	OR10S1	Q8NGN2	331 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	C5orf66	Q9H5L9	145 aa		11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZNF701	Q9NV72	531 aa	Predicted RBP	11.9	□□□□□ -0.5
SUPT20H-222	ENST00000495071	IGLV3-19	P01714	112 aa		11.9	□□□□□ -0.51
SUPT20H-222	ENST00000495071	MPZ	P25189	248 aa		11.9	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ACTBL2	Q562R1	376 aa		11.9	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PLAC9	Q5JTB6	97 aa		11.9	□□□□□ -0.51
SUPT20H-222	ENST00000495071	THEM4	Q5T1C6	240 aa		11.9	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PEG10	Q86TG7	708 aa	Known RBP	11.9	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ZNF441	Q8N8Z8	693 aa		11.9	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OR8B12	Q8NGG6	310 aa		11.9	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NDRG3	Q9UGV2	375 aa		11.9	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ZNF175	Q9Y473	711 aa		11.9	□□□□□ -0.51
SUPT20H-222	ENST00000495071	MSGN1	A6NI15	193 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SFT2D2	O95562	160 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SRSF3	P84103	164 aa	Known RBP	11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	FOXK1	P85037	733 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RNF126	Q9BV68	326 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OR5AC2	Q9NZP5	309 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	FAM96B	Q9Y3D0	163 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	TMEM131	Q92545	1883 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071		H0YIZ8	118 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SNAPIN	O95295	136 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PET100	P0DJ07	73 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	GSK3A	P49840	483 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	MFAP5	Q13361	173 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	CHRFAM7A	Q494W8	412 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PGAP1	Q75T13	922 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NAA40	Q86UY6	237 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	BHLHE23	Q8NDY6	225 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PGAM5	Q96HS1	289 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	TLNRD1	Q9H1K6	362 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OR10A2	Q9H208	303 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RHBDD3	Q9Y3P4	386 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	LHFPL6	Q9Y693	200 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ZNF43	P17038	809 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	GLRA1	P23415	457 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SNU13	P55769	128 aa	Known RBP	11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RAB32	Q13637	225 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RAB11FIP2	Q7L804	512 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	LINC00518	Q8N0U6	118 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	CHRNA10	Q9GZZ6	450 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	GPR132	Q9UNW8	380 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071	COL4A2	P08572	1712 aa		11.89	□□□□□ -0.51
SUPT20H-222	ENST00000495071		A0A0A6YYD4	124 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SERPINA2	P20848	420 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	BLVRB	P30043	206 aa	Predicted RBP	11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RAB30	Q15771	203 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	FAM189A2	Q15884	450 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SLC30A7	Q8NEW0	376 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OR51F2	Q8NH61	342 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NECAB3	Q96P71	396 aa	Predicted RBP	11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	MOB1A	Q9H8S9	216 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	LMAN1L	Q9HAT1	526 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RAB18	Q9NP72	206 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	C14orf166	Q9Y224	244 aa	Known RBP	11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	MEMO1	Q9Y316	297 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	FBXO24	O75426	580 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SERPINA5	P05154	406 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NME2	P22392	152 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	EIF5AL1	Q6IS14	154 aa	Known RBP	11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PRSS54	Q6PEW0	395 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NOXO1	Q8NFA2	376 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	CYYR1	Q96J86	154 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	METTL12	A8MUP2	240 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms