RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 ZNF391Q9UJN7 358 aa6.96□□□□□ -1.3
FDPS-218ENST00000492887 POU2F3Q9UKI9 436 aa6.96□□□□□ -1.3
FDPS-218ENST00000492887 FOXJ3Q9UPW0 622 aa6.96□□□□□ -1.3
FDPS-218ENST00000492887 SPEF1Q9Y4P9 236 aa6.96□□□□□ -1.3
FDPS-218ENST00000492887 PEX16Q9Y5Y5 336 aa6.96□□□□□ -1.3
FDPS-218ENST00000492887 V9GYS6 101 aa6.96□□□□□ -1.3
FDPS-218ENST00000492887 RP1L1Q8IWN7 2480 aaPredicted RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 CHD8Q9HCK8 2581 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 ZNF816-ZNF321PA0A0X1KG74 233 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 hCG_38984A0A1B0GV85 526 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 FAM230AA0A1W2PPH8 454 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 MEGF11A6BM72 1044 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 ANKRD30BLA7E2S9 258 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 SULT1B1O43704 296 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 TIMM8AO60220 97 aaPredicted RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 NGFP01138 241 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 IGKV3-15P01624 115 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 SLC2A2P11168 524 aaPredicted RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 PPP3CBP16298 524 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 ATF1P18846 271 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 CCL1P22362 96 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 GCH1P30793 250 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 CCKARP32238 428 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 WNT5AP41221 380 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 GSK3AP49840 483 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 PSMD7P51665 324 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 NAAAQ02083 359 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 SNTB2Q13425 540 aaKnown RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 MADCAM1Q13477 382 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 HLXQ14774 488 aaPredicted RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 P2RY14Q15391 338 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 RAB11BQ15907 218 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 RSPO1Q2MKA7 263 aaPredicted RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 KRTAP27-1Q3LI81 207 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 C4orf17Q53FE4 359 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 RGS7BPQ6MZT1 257 aaPredicted RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 PRSS45Q7RTY3 260 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 ZNF101Q8IZC7 436 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 PNLDC1Q8NA58 520 aaKnown RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 BHLHE23Q8NDY6 225 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 CSNK2A3Q8NEV1 391 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 OR56B2PQ8NGI1 322 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 OR51A2Q8NGJ7 313 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 SLC25A40Q8TBP6 338 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 TBC1D15Q8TC07 691 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 ACOT12Q8WYK0 555 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 PP6455Q8WZ26 134 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 RNASE6Q93091 150 aaKnown RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 RFT1Q96AA3 541 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 BORCS8Q96FH0 119 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 NKX3-1Q99801 234 aaPredicted RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 BARHL1Q9BZE3 327 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 BCL2L14Q9BZR8 327 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 WDR12Q9GZL7 423 aaKnown RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 SLIRPQ9GZT3 109 aaKnown RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 POFUT1Q9H488 388 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 ELL3Q9HB65 397 aaPredicted RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 NGBQ9NPG2 151 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 TBCCD1Q9NVR7 557 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 CGGBP1Q9UFW8 167 aaPredicted RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 NDRG3Q9UGV2 375 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 SLC7A11Q9UPY5 501 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 STARD10Q9Y365 291 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 ATP23Q9Y6H3 246 aa6.95□□□□□ -1.3
FDPS-218ENST00000492887 RAI1Q7Z5J4 1906 aaPredicted RBP6.95□□□□□ -1.3
FDPS-218ENST00000492887 IGHV2OR16-5A0A0B4J2B6 119 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 TRIM64BA6NI03 449 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 B8ZZF3 427 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 J3QW42 95 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 LCE2BO14633 110 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 HPGDSO60760 199 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 PLATP00750 562 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 NRASP01111 189 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 SNRPBP14678 240 aaKnown RBP6.94□□□□□ -1.3
FDPS-218ENST00000492887 SELEP16581 610 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 AZGP1P25311 298 aaKnown RBP6.94□□□□□ -1.3
FDPS-218ENST00000492887 TALDO1P37837 337 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 DDOSTP39656 456 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 RAD52P43351 418 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 RANBP1P43487 201 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 POU3F4P49335 361 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 UCP2P55851 309 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 CLDN12P56749 244 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 RPS23P62266 143 aaKnown RBP6.94□□□□□ -1.3
FDPS-218ENST00000492887 FAM3AP98173 230 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 LSAMPQ13449 338 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 SNTB1Q13884 538 aaKnown RBP6.94□□□□□ -1.3
FDPS-218ENST00000492887 GK2Q14410 553 aaPredicted RBP6.94□□□□□ -1.3
FDPS-218ENST00000492887 ZNF846Q147U1 533 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 ZNF718Q3SXZ3 478 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 SPANXN2Q5MJ10 180 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 CLVS2Q5SYC1 327 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 AWAT2Q6E213 333 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 OR2T2Q6IF00 324 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 TMEM108Q6UXF1 575 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 SSX8Q7RTT4 187 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 LRRTM1Q86UE6 522 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 ZDHHC23Q8IYP9 409 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 PARP16Q8N5Y8 322 aa6.94□□□□□ -1.3
FDPS-218ENST00000492887 OR6Q1Q8NGQ2 317 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms