RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	GK2	Q14410	553 aa	Predicted RBP	12.83	□□□□□ -0.36
COPS7B-222	ENST00000492423	DGUOK	Q16854	277 aa		12.83	□□□□□ -0.36
COPS7B-222	ENST00000492423	ZNF529	Q6P280	563 aa		12.83	□□□□□ -0.36
COPS7B-222	ENST00000492423	OR51A2	Q8NGJ7	313 aa		12.83	□□□□□ -0.36
COPS7B-222	ENST00000492423	CA5BP1	Q8WTZ4	195 aa		12.83	□□□□□ -0.36
COPS7B-222	ENST00000492423	REPIN1	Q9BWE0	567 aa	Known RBP	12.83	□□□□□ -0.36
COPS7B-222	ENST00000492423	NXF2	Q9GZY0	626 aa	Known RBP	12.83	□□□□□ -0.36
COPS7B-222	ENST00000492423	TPK1	Q9H3S4	243 aa		12.83	□□□□□ -0.36
COPS7B-222	ENST00000492423	TCF7L1	Q9HCS4	588 aa		12.83	□□□□□ -0.36
COPS7B-222	ENST00000492423	PLEKHB1	Q9UF11	243 aa	Predicted RBP	12.83	□□□□□ -0.36
COPS7B-222	ENST00000492423	AK6	Q9Y3D8	172 aa	Known RBP	12.83	□□□□□ -0.36
COPS7B-222	ENST00000492423	ASH1L	Q9NR48	2969 aa	Known RBP	12.83	□□□□□ -0.36
COPS7B-222	ENST00000492423	ZNF462	Q96JM2	2506 aa		12.83	□□□□□ -0.36
COPS7B-222	ENST00000492423	ZG16	O60844	167 aa		12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	MTRF1	O75570	445 aa	Known RBP	12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	FAH	P16930	419 aa		12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	ZNF20	P17024	532 aa		12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	RAB3B	P20337	219 aa		12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	CFL1	P23528	166 aa	Known RBP	12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	PPP1CB	P62140	327 aa		12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	SPOCK1	Q08629	439 aa		12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	HLX	Q14774	488 aa	Predicted RBP	12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	ALKBH2	Q6NS38	261 aa		12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	WFDC8	Q8IUA0	241 aa		12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	ZC3HAV1L	Q96H79	300 aa	Known RBP	12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	WFIKKN1	Q96NZ8	548 aa		12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	ZCCHC4	Q9H5U6	513 aa		12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	PLEKHA1	Q9HB21	404 aa		12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	CRIM1	Q9NZV1	1036 aa		12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	EIF3K	Q9UBQ5	218 aa	Known RBP	12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	PIGL	Q9Y2B2	252 aa		12.82	□□□□□ -0.36
COPS7B-222	ENST00000492423	PDCD5	O14737	125 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	MAS1	P04201	325 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	AGA	P20933	346 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	MAP2K3	P46734	347 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	RORC	P51449	518 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	UCP2	P55851	309 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	SORD	Q00796	357 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	MALL	Q13021	153 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	FBXW12	Q6X9E4	464 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	SSX8	Q7RTT4	187 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	MRPL21	Q7Z2W9	205 aa	Known RBP	12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	SERPINA12	Q8IW75	414 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	OR5AS1	Q8N127	324 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	ZNF808	Q8N4W9	903 aa	Predicted RBP	12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	SEMA6D	Q8NFY4	1073 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	OR1M1	Q8NGA1	313 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	OR56B2P	Q8NGI1	322 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	OR5L1	Q8NGL2	311 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	OR1J1	Q8NGS3	322 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	OR13C9	Q8NGT0	318 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	SLC25A40	Q8TBP6	338 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	C10orf35	Q96D05	121 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	CHST5	Q9GZS9	411 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	SLITRK2	Q9H156	845 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	OPA3	Q9H6K4	179 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423	KCNJ16	Q9NPI9	418 aa		12.81	□□□□□ -0.36
COPS7B-222	ENST00000492423		A0A075B6Q4	140 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	IGKV1-9	A0A0C4DH69	117 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	NOTO	A8MTQ0	251 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423		J3QKU1	62 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	CLPX	O76031	633 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	CD37	P11049	281 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	CD40	P25942	277 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	THBS2	P35442	1172 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	SOX6	P35712	828 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	GNAL	P38405	381 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	RIPPLY1	Q0D2K3	151 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	SNTB1	Q13884	538 aa	Known RBP	12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	ZNF404	Q494X3	552 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	TMEM255A	Q5JRV8	349 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	SPATA46	Q5T0L3	261 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	ZBTB37	Q5TC79	503 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	TMEM42	Q69YG0	159 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	SFXN4	Q6P4A7	337 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	XKRX	Q6PP77	449 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	PGAP1	Q75T13	922 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	UTS2B	Q765I0	119 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	LYPD6	Q86Y78	171 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	DNAAF1	Q8NEP3	725 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	MCFD2	Q8NI22	146 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	UBASH3B	Q8TF42	649 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	OR2J1	Q9GZK6	312 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	RHBDD3	Q9Y3P4	386 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	A3GALT2	U3KPV4	340 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	NBAS	A2RRP1	2371 aa		12.8	□□□□□ -0.36
COPS7B-222	ENST00000492423	SETX	Q7Z333	2677 aa	Known RBP	12.79	□□□□□ -0.36
COPS7B-222	ENST00000492423	DPRX	A6NFQ7	191 aa		12.79	□□□□□ -0.36
COPS7B-222	ENST00000492423	SULT1B1	O43704	296 aa		12.79	□□□□□ -0.36
COPS7B-222	ENST00000492423	CLDN14	O95500	239 aa		12.79	□□□□□ -0.36
COPS7B-222	ENST00000492423	SLC2A2	P11168	524 aa	Predicted RBP	12.79	□□□□□ -0.36
COPS7B-222	ENST00000492423	ATF1	P18846	271 aa		12.79	□□□□□ -0.36
COPS7B-222	ENST00000492423	NKX6-1	P78426	367 aa	Predicted RBP	12.79	□□□□□ -0.36
COPS7B-222	ENST00000492423	MSMP	Q1L6U9	139 aa		12.79	□□□□□ -0.36
COPS7B-222	ENST00000492423	KRT74	Q7RTS7	529 aa		12.79	□□□□□ -0.36
COPS7B-222	ENST00000492423	TBC1D15	Q8TC07	691 aa		12.79	□□□□□ -0.36
COPS7B-222	ENST00000492423	SSC4D	Q8WTU2	575 aa		12.79	□□□□□ -0.36
COPS7B-222	ENST00000492423	PP6455	Q8WZ26	134 aa		12.79	□□□□□ -0.36
COPS7B-222	ENST00000492423	ITFG2	Q969R8	447 aa		12.79	□□□□□ -0.36
COPS7B-222	ENST00000492423	LRRC46	Q96FV0	321 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms