RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 FGF9P31371 208 aaPredicted RBP6.54□□□□□ -1.36
CLDN1-202ENST00000490800 KIR3DL2P43630 455 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 SERPINB10P48595 397 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 ATP5J2P56134 94 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 RPS11P62280 158 aaKnown RBP eCLIP6.54□□□□□ -1.36
CLDN1-202ENST00000490800 MFGE8Q08431 387 aaPredicted RBP6.54□□□□□ -1.36
CLDN1-202ENST00000490800 FAPQ12884 760 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 INSL4Q14641 139 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 TRAM1Q15629 374 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 NRN1LQ496H8 165 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 CCDC92Q53HC0 331 aaPredicted RBP6.54□□□□□ -1.36
CLDN1-202ENST00000490800 WDR38Q5JTN6 314 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 FBXW9Q5XUX1 488 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 C22orf42Q6IC83 251 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 ADAM5Q6NVV9 412 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 KLHL24Q6TFL4 600 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF813Q6ZN06 617 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 Q6ZT83 130 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 USP43Q70EL4 1123 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF627Q7L945 461 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 CATSPERDQ86XM0 798 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 LRRC18Q8N456 261 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 SLC22A24Q8N4F4 322 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 MS4A15Q8N5U1 240 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 GJC3Q8NFK1 279 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 IL17RDQ8NFM7 739 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 KBTBD8Q8NFY9 601 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 OR13C5Q8NGS8 318 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 ABHD4Q8TB40 342 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 DYNC2LI1Q8TCX1 351 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 RGP1Q92546 391 aaPredicted RBP6.54□□□□□ -1.36
CLDN1-202ENST00000490800 COQ7Q99807 217 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 PDCD1LG2Q9BQ51 273 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 DCSTAMPQ9H295 470 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 CXorf56Q9H5V9 222 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 ESRP2Q9H6T0 727 aaKnown RBP6.54□□□□□ -1.36
CLDN1-202ENST00000490800 NGBQ9NPG2 151 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 G6PC2Q9NQR9 355 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 MALT1Q9UDY8 824 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 FBXL7Q9UJT9 491 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 SLC22A13Q9Y226 551 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF281Q9Y2X9 895 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 RNF115Q9Y4L5 304 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 R4GMQ9 66 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 ROS1P08922 2347 aa6.54□□□□□ -1.36
CLDN1-202ENST00000490800 ARID1AO14497 2285 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 TMEM212A6NML5 194 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF878C9JN71 531 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 SC5DO75845 299 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 ITGA5P08648 1049 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 MMP7P09237 267 aaPredicted RBP6.53□□□□□ -1.36
CLDN1-202ENST00000490800 DANCRP0C864 163 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 PATE4P0C8F1 98 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF32P17041 273 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 IGHV1-2P23083 117 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 MPGP29372 298 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 DCTDP32321 178 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 CDKN1AP38936 164 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 CCR9P51686 369 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 SH3BGRP55822 239 aaPredicted RBP6.53□□□□□ -1.36
CLDN1-202ENST00000490800 RPL11P62913 178 aaKnown RBP6.53□□□□□ -1.36
CLDN1-202ENST00000490800 BSPH1Q075Z2 132 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 TNK1Q13470 666 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 RSPO1Q2MKA7 263 aaPredicted RBP6.53□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF829Q3KNS6 432 aaPredicted RBP6.53□□□□□ -1.36
CLDN1-202ENST00000490800 ACSM3Q53FZ2 586 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 ELFN2Q5R3F8 820 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 C9orf135Q5VTT2 229 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 UNQ9370/PRO34162Q6UXP9 181 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 RHOUQ7L0Q8 258 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 SLC16A14Q7RTX9 510 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 ABHD12BQ7Z5M8 362 aaPredicted RBP6.53□□□□□ -1.36
CLDN1-202ENST00000490800 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.53□□□□□ -1.36
CLDN1-202ENST00000490800 SKA3Q8IX90 412 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 UBE2J2Q8N2K1 259 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 FGFBP3Q8TAT2 258 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 BCL2L2Q92843 193 aaPredicted RBP6.53□□□□□ -1.36
CLDN1-202ENST00000490800 FBXW5Q969U6 566 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 KCTD7Q96MP8 289 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 JMJD8Q96S16 334 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 WNT5BQ9H1J7 359 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 PPIL3Q9H2H8 161 aaKnown RBP6.53□□□□□ -1.36
CLDN1-202ENST00000490800 NIPAL2Q9H841 368 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 DDX28Q9NUL7 540 aaKnown RBP6.53□□□□□ -1.36
CLDN1-202ENST00000490800 FAM206AQ9NX38 181 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 CISD1Q9NZ45 108 aaKnown RBP6.53□□□□□ -1.36
CLDN1-202ENST00000490800 ZNF224Q9NZL3 707 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 DSCAMO60469 2012 aa6.53□□□□□ -1.36
CLDN1-202ENST00000490800 PRR14LQ5THK1 2151 aa6.52□□□□□ -1.36
CLDN1-202ENST00000490800 TRBV5-5A0A0J9YX44 114 aa6.52□□□□□ -1.37
CLDN1-202ENST00000490800 TMEM269A0A1B0GVZ9 245 aa6.52□□□□□ -1.37
CLDN1-202ENST00000490800 OR6C6A6NF89 314 aa6.52□□□□□ -1.37
CLDN1-202ENST00000490800 INAFM1C9JVW0 142 aa6.52□□□□□ -1.37
CLDN1-202ENST00000490800 LOC110117498-PIK3R3F6TDL0 507 aa6.52□□□□□ -1.37
CLDN1-202ENST00000490800 OVOL3O00110 214 aa6.52□□□□□ -1.37
CLDN1-202ENST00000490800 SGCEO43556 437 aa6.52□□□□□ -1.37
CLDN1-202ENST00000490800 SYNGR3O43761 229 aa6.52□□□□□ -1.37
CLDN1-202ENST00000490800 NDUFS7O75251 213 aa6.52□□□□□ -1.37
CLDN1-202ENST00000490800 FARS2O95363 451 aaKnown RBP6.52□□□□□ -1.37
CLDN1-202ENST00000490800 SERPINA3P01011 423 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms