RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ANKRD65E5RJM6 399 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 SLC16A6O15403 523 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 IGHV2-70P01814 119 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 IRF2P14316 349 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 OR8B8Q15620 311 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 MOGAT3Q86VF5 341 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 LRRC28Q86X40 367 aaPredicted RBP14.62□□□□□ -0.07
MDC1-206ENST00000489540 ZNF555Q8NEP9 628 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 OR10H4Q8NGA5 316 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 OR11L1Q8NGX0 322 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 Q8TCH9 128 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 POM121Q96HA1 1249 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 Q96MT0 163 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 SIGLEC11Q96RL6 698 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 PBOV1Q9GZY1 135 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 C14orf119Q9NWQ9 140 aa14.62□□□□□ -0.07
MDC1-206ENST00000489540 SMPD3Q9NY59 655 aaPredicted RBP14.62□□□□□ -0.07
MDC1-206ENST00000489540 CHD3Q12873 2000 aaKnown RBP14.62□□□□□ -0.07
MDC1-206ENST00000489540 IGHV3-64DA0A0J9YX35 117 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 SULT1C4O75897 302 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 FSTL3O95633 263 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 PTBP3O95758 552 aaKnown RBP14.61□□□□□ -0.07
MDC1-206ENST00000489540 IGHV2-5P01817 119 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 KRT8P05787 483 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 GNALP38405 381 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 BTG1P62324 171 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 TMEM155Q4W5P6 130 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 SPICQ8N5J4 248 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 RFLNBQ8N5W9 214 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 PACRGLQ8N7B6 248 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 OR8S1Q8NH09 359 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 RHOXF1Q8NHV9 184 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 ZNF420Q8TAQ5 688 aaPredicted RBP14.61□□□□□ -0.07
MDC1-206ENST00000489540 LYZL4Q96KX0 146 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 TBX5Q99593 518 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 TTTY10Q9BZA0 68 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 MOB1AQ9H8S9 216 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 FN3KRPQ9HA64 309 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 LPAR3Q9UBY5 353 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 NUFIP1Q9UHK0 495 aaKnown RBP14.61□□□□□ -0.07
MDC1-206ENST00000489540 MRM2Q9UI43 246 aaKnown RBP14.61□□□□□ -0.07
MDC1-206ENST00000489540 CDC42EP3Q9UKI2 254 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 PCDHGB1Q9Y5G3 927 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 R4GMQ9 66 aa14.61□□□□□ -0.07
MDC1-206ENST00000489540 METTL15A6NJ78 407 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 FAM157AC9JC47 383 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 MAGEB4O15481 346 aaPredicted RBP14.6□□□□□ -0.07
MDC1-206ENST00000489540 APOL3O95236 402 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 CST4P01036 141 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 ATP6V1B1P15313 513 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 GABRB1P18505 474 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 PCMT1P22061 227 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 MDH2P40926 338 aaKnown RBP14.6□□□□□ -0.07
MDC1-206ENST00000489540 PMELP40967 661 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 DVL1P1P54792 670 aaPredicted RBP14.6□□□□□ -0.07
MDC1-206ENST00000489540 ENTHD1Q8IYW4 607 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 MUC20Q8N307 709 aaPredicted RBP14.6□□□□□ -0.07
MDC1-206ENST00000489540 GALNT4Q8N4A0 578 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 KLHL36Q8N4N3 616 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 OR51F2Q8NH61 342 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 RNFT2Q96EX2 444 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 PAPOLGQ9BWT3 736 aaKnown RBP14.6□□□□□ -0.07
MDC1-206ENST00000489540 ABCB9Q9NP78 766 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 PCDHB10Q9UN67 800 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 RHBDD3Q9Y3P4 386 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 MPC1Q9Y5U8 109 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 SNX5Q9Y5X3 404 aa14.6□□□□□ -0.07
MDC1-206ENST00000489540 NSD1Q96L73 2696 aaPredicted RBP14.59□□□□□ -0.07
MDC1-206ENST00000489540 LOC110117498-PIK3R3F6TDL0 507 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 SRSF10O75494 262 aaKnown RBP14.59□□□□□ -0.07
MDC1-206ENST00000489540 CYB5R3P00387 301 aaPredicted RBP14.59□□□□□ -0.07
MDC1-206ENST00000489540 PNPP00491 289 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 MSMBP08118 114 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 CPT2P23786 658 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 MAP2K3P46734 347 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 ACTC1P68032 377 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 ACTA1P68133 377 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 IL5RAQ01344 420 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 ZMYND11Q15326 602 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 LRRC36Q1X8D7 754 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 CHRFAM7AQ494W8 412 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 ZNF684Q5T5D7 378 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 PRAMEF6Q5VXH4 476 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 PLEKHG7Q6ZR37 379 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 SSX6Q7RTT6 188 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 GLCCI1Q86VQ1 547 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 YIPF7Q8N8F6 280 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 SHARPINQ9H0F6 387 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 UFSP2Q9NUQ7 469 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 UBAP1Q9NZ09 502 aa14.59□□□□□ -0.07
MDC1-206ENST00000489540 ANXA2P2A6NMY6 339 aa14.58□□□□□ -0.07
MDC1-206ENST00000489540 DLGAP1O14490 977 aa14.58□□□□□ -0.07
MDC1-206ENST00000489540 MTRF1O75570 445 aaKnown RBP14.58□□□□□ -0.07
MDC1-206ENST00000489540 ACKR3P25106 362 aa14.58□□□□□ -0.07
MDC1-206ENST00000489540 HNRNPA0Q13151 305 aaKnown RBP14.58□□□□□ -0.07
MDC1-206ENST00000489540 MPPED2Q15777 294 aa14.58□□□□□ -0.07
MDC1-206ENST00000489540 BCL2L15Q5TBC7 163 aa14.58□□□□□ -0.07
MDC1-206ENST00000489540 LPCAT4Q643R3 524 aa14.58□□□□□ -0.07
MDC1-206ENST00000489540 KRT74Q7RTS7 529 aa14.58□□□□□ -0.07
MDC1-206ENST00000489540 KCTD20Q7Z5Y7 419 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms